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De novo protein structure prediction

Known as: Ab initio structure prediction, De novo 
In computational biology, de novo protein structure prediction refers to an algorithmic process by which protein tertiary structure is predicted from… 
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Broader (1)

Bioinformatics
CASPComputational biologyFolding@homeLoop modeling

Papers overview

Semantic Scholar uses AI to extract papers important to this topic.
2013
2013
Off-lattice protein structure prediction with homologous crossover
Ab-initio structure prediction refers to the problem of using only knowledge of the sequence of amino acids in a protein molecule… 
2008
2008
Hemagglutinating activity and corresponding putative sequence identity from Curcuma aromatica rhizome
BACKGROUND:Curcuma aromatica is a medicinal plant belonging to the Zingiberaceae family with an incomplete genome sequence. It… 
2007
2007
De Novo Protein Structure Prediction
An unparalleled amount of sequence data is being made available from large-scale genome sequencing efforts. The data provide a… 
2005
2005
Regulation of elicitin-induced ethylene production in suspension-cultured tobacco BY-2 cells
INF1 elicitin, a proteinaceous elicitor produced by Phytophthora infestans, induces a hypersensitive response in tobacco BY-2… 
2005
2005
Differential secretion of TNF-α and IFN-γ by human peripheral blood-derived NK subsets and association with functional maturation
Natural killer cells can be separated into three major subsets (free, binder, and killer) based on their ability to bind and kill… 
2003
2003
A model of random sequences for de novo peptide sequencing
We present a model for the probability of random sequences appearing in product ion spectra obtained from tandem mass… 
2000
2000
Induction of cyclooxygenase-2 by platelet-derived growth factor (PDGF) and its inhibition by dexamethasone are independent of NF-κB/IκB transcription factors
Abstract. Glucocorticoids are potent inhibitors of cyclooxygenase-2 (prostaglandin G/H synthase-2, COX-2) expression. The focus… 
2000
2000
Helix‐coil and beta sheet‐coil transitions in a simplified, yet realistic protein model
Full Paper: A reduced model of polypeptide chains and protein stochastic dynamics is employed in Monte Carlo studies of the coil… 
1998
1998
Interplay of strong and weak hydrogen bonding in molecular complexes of some 4,4′-disubstituted biphenyls with urea, thiourea and water
The crystal chemistry and engineering of a new family of host–guest complexes is described. 4,4′-Dicyanobiphenyl (DCBP) forms a 1… 
1979
1979
Comparison of the predicted model of α-lytic protease with the X-ray structure
THERE are several methods for the prediction of secondary structural features of protein molecules from the amino acid sequence1… 
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