Loop modeling

Known as: Loop modelling 
Loop modeling is a problem in protein structure prediction requiring the prediction of the conformations of loop regions in proteins with or without… (More)
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Broader (1)

Bioinformatics
Conserved sequenceDe novo protein structure predictionHomology modelingMODELLER
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Papers overview

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2016
2016
RCD+: Fast loop modeling server
Modeling loops is a critical and challenging step in protein modeling and prediction. We have developed a quick online service… (More)
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2013
2013
LoopWeaver: Loop Modeling by the Weighted Scaling of Verified Proteins
Modeling loops is a necessary step in protein structure determination, even with experimental nuclear magnetic resonance (NMR… (More)
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2012
2012
Closed-loop system modeling, validation, and verification
Control software engineering has become a weighty factor according to implementation expense, especially when developing a new… (More)
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2011
2011
The FALC-Loop web server for protein loop modeling
The FALC-Loop web server provides an online interface for protein loop modeling by employing an ab initio loop modeling method… (More)
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Highly Cited
2009
Highly Cited
2009
Closed-Loop Modeling in Future Automation System Engineering and Validation
This paper presents a new framework for design and validation of industrial automation systems based on systematic application of… (More)
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2008
2008
Protein Loop Modeling Using Fragment Assembly
We model loop regions of proteins based on a fragment assembly method. The fragments that comprise candidates of the local… (More)
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2007
2007
Modeling protein loops with knowledge-based prediction of sequence-structure alignment
MOTIVATION As protein structure database expands, protein loop modeling remains an important and yet challenging problem… (More)
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Highly Cited
2003
Highly Cited
2003
ModLoop: automated modeling of loops in protein structures
SUMMARY ModLoop is a web server for automated modeling of loops in protein structures. The input is the atomic coordinates of the… (More)
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Highly Cited
2003
Highly Cited
2003
Tools for comparative protein structure modeling and analysis
The following resources for comparative protein structure modeling and analysis are described (http://salilab.org): MODELLER, a… (More)
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Highly Cited
2002
Highly Cited
2002
The assimilation of remotely sensed soil brightness temperature imagery into a land surface model using Ensemble Kalman filtering : a case study based on ESTAR measurements during SGP 97
An Ensemble Kalman filter (EnKF) is used to assimilate airborne measurements of 1.4 GHz surface brightness temperature ðTB… (More)
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