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UCLUST

UCLUSTis an algorithm designed to cluster nucleotide or amino-acid sequences into clusters based on sequence similarity. The algorithm was published… 
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Related topics

Related topics

3 relations
AlgorithmSequence clustering

Broader (1)

Metagenomics

Papers overview

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2018
2018
Comparative Analysis of Sequence Clustering Methods for Deduplication of Biological Databases
The massive volumes of data in biological sequence databases provide a remarkable resource for large-scale biological studies… 
2018
2018
Choosing Non-redundant Representative Subsets Of Protein Sequence Data Sets Using Submodular Optimization
Selecting a non-redundant representative subset of sequences is a common step in many bioinformatics workflows, such as the… 
2017
2017
Distinct sensitivity of fungal freshwater guilds to water quality
Multiple anthropogenic stressors have been shown to impact animal and plant communities in freshwater ecosystems, but the… 
2017
2017
Semantically Defining Populations for 'Omics Research
The study of populations is central to ‘omics research, whether sequencing environmental samples, controlling for population… 
2016
2016
The Influence of Restoration on Salt Marsh Microbial Communities and Senetrification Capacity
Salt marshes play a large role in filtering pollution and nutrients as well as providing habitat for a wide array of species… 
2015
2015
uCLUST - A NEW ALGORITHM FOR CLUSTERING UNSTRUCTURED DATA
Data that resides in a fixed field within a record or file is called structured data and have a defined schema. Unstructured Data… 
Highly Cited
2013
Highly Cited
2013
Illumina metabarcoding of a soil fungal community
2013
2013
kClust: fast and sensitive clustering of large protein sequence databases
Fueled by rapid progress in high-throughput sequencing, the size of public sequence databases doubles every two years. Searching… 
2012
2012
DACIDR: deterministic annealed clustering with interpolative dimension reduction using a large collection of 16S rRNA sequences
The recent advance in next generation sequencing (NGS) techniques has enabled the direct analysis of the genetic information… 
2011
2011
CloVR-Metagenomics: Functional and taxonomic microbial community characterization from metagenomic whole-genome shotgun (WGS) sequences – standard operating procedure, version 1.0
The CloVR-Metagenomics pipeline employs several well-known tools and protocols for the analysis of metagenomic whole-genome… 
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