FAQ

UCLUST

UCLUSTis an algorithm designed to cluster nucleotide or amino-acid sequences into clusters based on sequence similarity. The algorithm was published… (More)
Wikipedia

Topic mentions per year

Topic mentions per year

2010-2017
02420102017

Related topics

Related topics

3 relations
AlgorithmSequence clustering

Broader (1)

Metagenomics

Related mentions per year

Related mentions per year

1936-2018
19401960198020002020
UCLUST
Algorithm
Metagenomics
Sequence clustering

Papers overview

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2016
2016
Distinct sensitivity of fungal freshwater guilds to water quality
Multiple anthropogenic stressors have been shown to impact animal and plant communities in freshwater ecosystems, but the… (More)
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2015
2015
Stochastic neutral modelling of the Gut Microbiota’s relative species abundance from next generation sequencing data
Interest in understanding the mechanisms that lead to a particular composition of the Gut Microbiota is highly increasing, due to… (More)
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2013
2013
kClust: fast and sensitive clustering of large protein sequence databases
Fueled by rapid progress in high-throughput sequencing, the size of public sequence databases doubles every two years. Searching… (More)
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Highly Cited
2013
Highly Cited
2013
Illumina metabarcoding of a soil fungal community
Next generation metabarcoding is becoming an indispensable tool in fungal community ecology. Here we tested Illumina… (More)
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2012
2012
DySC: software for greedy clustering of 16S rRNA reads
UNLABELLED Pyrosequencing technologies are frequently used for sequencing the 16S ribosomal RNA marker gene for profiling… (More)
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2012
2012
Clustering evolving proteins into homologous families
Clustering sequences into groups of putative homologs (families) is a critical first step in many areas of comparative biology… (More)
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2012
2012
TaxMan: a server to trim rRNA reference databases and inspect taxonomic coverage
Amplicon sequencing of the hypervariable regions of the small subunit ribosomal RNA gene is a widely accepted method for… (More)
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Highly Cited
2011
Highly Cited
2011
DNACLUST: accurate and efficient clustering of phylogenetic marker genes
Clustering is a fundamental operation in the analysis of biological sequence data. New DNA sequencing technologies have… (More)
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Highly Cited
2010
Highly Cited
2010
Search and clustering orders of magnitude faster than BLAST
MOTIVATION Biological sequence data is accumulating rapidly, motivating the development of improved high-throughput methods for… (More)
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2010
2010
A grammar-based distance metric enables fast and accurate clustering of large sets of 16S sequences
We propose a sequence clustering algorithm and compare the partition quality and execution time of the proposed algorithm with… (More)
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