Skip to search formSkip to main contentSkip to account menu

UCLUST

UCLUSTis an algorithm designed to cluster nucleotide or amino-acid sequences into clusters based on sequence similarity. The algorithm was published… 
Wikipedia (opens in a new tab)

Related topics

Related topics

3 relations
AlgorithmSequence clustering

Broader (1)

Metagenomics

Papers overview

Semantic Scholar uses AI to extract papers important to this topic.
2018
2018
Comparative Analysis of Sequence Clustering Methods for Deduplication of Biological Databases
The massive volumes of data in biological sequence databases provide a remarkable resource for large-scale biological studies… 
2017
2017
Distinct sensitivity of fungal freshwater guilds to water quality
Multiple anthropogenic stressors have been shown to impact animal and plant communities in freshwater ecosystems, but the… 
2017
2017
Better Greedy Sequence Clustering with Fast Banded Alignment
Comparing a string to a large set of sequences is a key subroutine in greedy heuristics for clustering genomic data. Clustering… 
2017
2017
Distinct sensitivity of fungal freshwater guilds to water quality
Multiple anthropogenic stressors have been shown to impact animal and plant communities in freshwater ecosystems, but the… 
Review
2017
Review
2017
CONE-FORMING CHLOROFLEXI MATS AS ANALOGS OF CONICAL STROMATOLITE FORMATION WITHOUT CYANOBACTERIA
Modern microbial mats provide useful process analogs for understanding the mechanics behind the production of ancient… 
2016
2016
The Influence of Restoration on Salt Marsh Microbial Communities and Senetrification Capacity
Salt marshes play a large role in filtering pollution and nutrients as well as providing habitat for a wide array of species… 
2016
2016
A pipeline for identifying integration sites of mobile elements in the genome using next-generation sequencing
Next Generation Sequencing (NGS) reads obtained by sequencing of the junction of a mobile element and the host flanking region… 
2015
2015
Predicting Clinical Phenotype Using OTU-Based Metagenome Representation
We demonstrate a computational method to predict the clinical phenotypes of a patient from raw metagenomic sequence read data. We… 
2012
2012
DACIDR: deterministic annealed clustering with interpolative dimension reduction using a large collection of 16S rRNA sequences
The recent advance in next generation sequencing (NGS) techniques has enabled the direct analysis of the genetic information… 
2011
2011
CloVR-Metagenomics: Functional and taxonomic microbial community characterization from metagenomic whole-genome shotgun (WGS) sequences – standard operating procedure, version 1.0
The CloVR-Metagenomics pipeline employs several well-known tools and protocols for the analysis of metagenomic whole-genome… 
By clicking accept or continuing to use the site, you agree to the terms outlined in our Privacy Policy (opens in a new tab), Terms of Service (opens in a new tab), and Dataset License (opens in a new tab)