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Protein structure database
Known as:
Protein structure databases
In biology, a protein structure database is a database that is modeled around the various experimentally determined protein structures. The aim of…
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Data modeling
Database
DiProDB: a database for dinucleotide properties.
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Papers overview
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Review
2017
Review
2017
Differential effects of novel anticoagulants : FXa versus FIIa inhibition on coagulation and inflammation
P. Stachon
,
P. Albrecht
,
+6 authors
A. Zirlik
2017
Corpus ID: 36075895
S of the 61 Annual Meeting of the Society of Thrombosis and Hemostasis Research 15-18 February 2017 Basel, Switzerland…
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2016
2016
In silico methods reconfirm CDK2 as a potential molecular target of 5-fluorouracil
V. Yata
,
S. Mahajan
,
+4 authors
V. S. Mattaparthi
2016
Corpus ID: 56087200
Vinod Kumar Yata1, Shweta Mahajan1, Arun Thapa1, Shadab Ahmed2, Akash Deep Biswas3, Airy Sanjeev3&Venkata Satish Kumar…
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2015
2015
A Framework to Accelerate Protein Structure Comparison Tools
Ahmad Salah
,
Kenli Li
,
Tarek F. Gharib
15th IEEE/ACM International Symposium on Cluster…
2015
Corpus ID: 17958812
At the center of computational structural biology, protein structure comparison is a key problem. The steady increase in the…
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2007
2007
Towards a Fully Automated Protein Structure Classiication: How to Get Cath Classiication from Fssp Z-scores
G. Getz
,
M. Vendruscolo
,
E. Domany
2007
Corpus ID: 16658941
Background: Currently, each week about 50 new protein structures are made available in public databases. The attention is focused…
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2006
2006
Non-planar amino groups : Protein structure database analysis and ab initio quantum chemical studies on model systems
D. Bhattacharyya
,
K. Sen
,
S. Mukherjee
2006
Corpus ID: 51994539
Hydrogen bond is one of the most important interactions in bio-molecular stability and recognition. Amino groups of nucleotides…
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2006
2006
Indexing methods for protein tertiary and predicted structures
Mohammed J. Zaki
,
F. Gao
2006
Corpus ID: 7195687
This thesis focuses on the problem of fast sub-structure search and remote homology detection in proteins by finding similar (sub…
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2005
2005
Sequence-Structure Patterns : Discovery and Applications
T. Milledge
,
S. Khuri
,
X. Wei
,
C. Yang
,
G. Zheng
,
G. Narasimhan
2005
Corpus ID: 8462321
Protein sequence data is being generated at a tremendous rate; however, functional annotation of these proteins is proceeding at…
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2003
2003
3 MATRIX and 3 MOTIF : A Protein Structure Visualization System for Conserved Sequence Motifs.
S. P. Bennett
,
Lu
,
Lin
,
Douglas L. Brutlag
2003
Corpus ID: 267847375
.
2001
2001
Entropic Approach for Reduction of Amino Acid Alphabets
Weinan Zheng
2001
Corpus ID: 37966900
The primitive data for deducing the Miyazawa-Jernigan contact energy or BLOSUM score metrix are the pair frequency counts. Each…
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1998
1998
Iditis : Protein Structure Database
Peter Murray-Rust
,
S. Islam
,
F. Hayes
1998
Corpus ID: 12476603
The validation, enrichment and organization of the data stored in PDB ®les is essential for those data to be used accurately and…
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