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Probalign

Probalign is a sequence alignment tool that calculates a maximum expected accuracy alignment using partition function posterior probabilities. Base… 
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Related topics

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BLOSUMDynamic programmingList of sequence alignment softwareProbCons

Papers overview

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2018
2018
ProbPFP: A Multiple Sequence Alignment Algorithm Combining Partition Function and Hidden Markov Model with Particle Swarm Optimization
The substitution score for pairwise sequence alignment is essential in conducting multiple sequence alignment (MSA). The Hidden… 
2014
2014
ProbAlign: a re-alignment method for long sequencing reads
The incorrect alignments are a severe problem in variant calling, and remain as a challenge computational issue in Bioinformatics… 
2011
2011
ROC curves for Probalign mean posterior probability and SSEARCH normalized Z-score
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