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ProbCons
ProbCons is an open source probabilistic consistency-based multiple alignment of amino acid sequences. It is an efficient protein multiple sequence…
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10 relations
AMAP
ClustalW/ClustalX
List of sequence alignment software
MUSCLE (alignment software)
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Broader (2)
Bioinformatics
Computational phylogenetics
Papers overview
Semantic Scholar uses AI to extract papers important to this topic.
2018
2018
ProbPFP: A Multiple Sequence Alignment Algorithm Combining Partition Function and Hidden Markov Model with Particle Swarm Optimization
Qing Zhan
,
Nan Wang
,
Shuilin Jin
,
Renjie Tan
,
Qinghua Jiang
,
Yadong Wang
IEEE International Conference on Bioinformatics…
2018
Corpus ID: 59236083
The substitution score for pairwise sequence alignment is essential in conducting multiple sequence alignment (MSA). The Hidden…
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2017
2017
PPCAS: Implementation of a Probabilistic Pairwise Model for Consistency-Based Multiple Alignment in Apache Spark
J. Lladós
,
F. Guirado
,
F. Cores
International Conference on Algorithms and…
2017
Corpus ID: 26196011
Large-scale data processing techniques, currently known as Big-Data, are used to manage the huge amount of data that are…
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2014
2014
Respiratory viruses and novel methods for virus discovery
S. M. J. Farsani
2014
Corpus ID: 90726790
This thesis focuses on respiratory virus infections in humans and the improvement of the VIDISCA virus discovery method. Human…
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2012
2012
A New Progressive Multiple Sequence Alignment Algorithm
S. Hosni
,
A. Mokaddem
,
M. Elloumi
23rd International Workshop on Database and…
2012
Corpus ID: 16104136
In this paper, we present a new progressive algorithm for Multiple Sequence Alignment (MSA). Our algorithm adopts a new distance…
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2011
2011
An Optimal Mesh Algorithm for Remote Protein Homology Detection
Firdaus M. Abdullah
,
R. Othman
,
S. Kasim
,
R. Hashim
International Conference on Ubiquitous Computing…
2011
Corpus ID: 21708756
Remote protein homology detection is a problem of detecting evolutionary relationship between proteins at low sequence similarity…
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2011
2011
Deriving DNA cryptographic keys based on evolutionary models
T. Hodorogea
,
Ionas Szilard Otto
,
Sarbu Janetta
International Conference on Innovative Computing…
2011
Corpus ID: 1470573
Based on the Central Dogma of Molecular Biology (CDMB), where we derive DNA Cryptographic Keys based on evolutionary models as…
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2011
2011
Security of Business to Business and Business to Customer Software Applications based on the Central Dogma of Molecular Biology (CDMB) and evolutionary models
T. Hodorogea
,
Ionas Szilard Otto
Proceedings of the ITI , 33rd International…
2011
Corpus ID: 17926164
The development, implementation and testing for Security of Business to Business and Business to Customer Software Applications…
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2011
2011
PAAA: A Progressive Iterative Alignment Algorithm Based on Anchors
A. Mokaddem
,
M. Elloumi
Pattern Recognition in Bioinformatics
2011
Corpus ID: 379070
In this paper, we present a new iterative progressive algorithm for Multiple Sequence Alignment (MSA), called Progressive…
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2007
2007
An evolutionary progressive multiple sequence alignment
F. Naznin
,
Morikazu Nakamura
,
T. Okazaki
,
Y. Nakajima
IEEE Congress on Evolutionary Computation
2007
Corpus ID: 43062973
This paper proposes an evolutionary tree-base (progressive multiple sequence alignment) method using a genetic algorithm (GA) for…
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2005
2005
( N – 1 ) / 2 Pairwise Alignments Consistency – based Refinement Guide Tree Building Progressive Multiple Alignment Global Multiple Alignment
Hongyi Zhou
,
Yaoqi Zhou
2005
Corpus ID: 3676482
Motivation: Multiple sequence alignment is an essential part of bioinformatics tools for a genome-scale study of genes and their…
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