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ProbCons

ProbCons is an open source probabilistic consistency-based multiple alignment of amino acid sequences. It is an efficient protein multiple sequence… 
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Related topics

Related topics

10 relations
AMAPClustalW/ClustalXList of sequence alignment softwareMUSCLE (alignment software)

Broader (2)

BioinformaticsComputational phylogenetics

Papers overview

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2018
2018
ProbPFP: A Multiple Sequence Alignment Algorithm Combining Partition Function and Hidden Markov Model with Particle Swarm Optimization
The substitution score for pairwise sequence alignment is essential in conducting multiple sequence alignment (MSA). The Hidden… 
2017
2017
PPCAS: Implementation of a Probabilistic Pairwise Model for Consistency-Based Multiple Alignment in Apache Spark
Large-scale data processing techniques, currently known as Big-Data, are used to manage the huge amount of data that are… 
2014
2014
Respiratory viruses and novel methods for virus discovery
This thesis focuses on respiratory virus infections in humans and the improvement of the VIDISCA virus discovery method. Human… 
2012
2012
A New Progressive Multiple Sequence Alignment Algorithm
In this paper, we present a new progressive algorithm for Multiple Sequence Alignment (MSA). Our algorithm adopts a new distance… 
2011
2011
An Optimal Mesh Algorithm for Remote Protein Homology Detection
Remote protein homology detection is a problem of detecting evolutionary relationship between proteins at low sequence similarity… 
2011
2011
Deriving DNA cryptographic keys based on evolutionary models
Based on the Central Dogma of Molecular Biology (CDMB), where we derive DNA Cryptographic Keys based on evolutionary models as… 
2011
2011
PAAA: A Progressive Iterative Alignment Algorithm Based on Anchors
In this paper, we present a new iterative progressive algorithm for Multiple Sequence Alignment (MSA), called Progressive… 
2011
2011
Security of Business to Business and Business to Customer Software Applications based on the Central Dogma of Molecular Biology (CDMB) and evolutionary models
The development, implementation and testing for Security of Business to Business and Business to Customer Software Applications… 
2007
2007
An evolutionary progressive multiple sequence alignment
This paper proposes an evolutionary tree-base (progressive multiple sequence alignment) method using a genetic algorithm (GA) for… 
2005
2005
( N – 1 ) / 2 Pairwise Alignments Consistency – based Refinement Guide Tree Building Progressive Multiple Alignment Global Multiple Alignment
Motivation: Multiple sequence alignment is an essential part of bioinformatics tools for a genome-scale study of genes and their… 
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