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Phred base calling

Known as: Phred 
Phred base-calling is a computer program for identifying a base (nucleobase) sequence from a fluorescence "trace" data generated by an automated DNA… 
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Related topics

Related topics

8 relations
Base callingCharge-coupled deviceCodonCode AlignerLadeana Hillier

Papers overview

Semantic Scholar uses AI to extract papers important to this topic.
2018
2018
Statistical modelling of Massively Parallel Sequencing data in forensic genetics
This PhD dissertation concerns itself with the statistical modelling of DNA samples quantified by massively parallel sequencing… 
2013
2013
Discovery of Phylogenetic Relevant Y-chromosome Variants in 1000 Genomes Project Data
Current Y chromosome research is limited in the poor resolution of Y chromosome phylogenetic tree. Entirely sequenced Y… 
2012
2012
Functional annotation of expressed sequence tags of Papaver somniferum.
Papaver somniferum (opium poppy) is the source for several pharmaceutical benzylisoquinoline alkaloids (BIA) including morphine… 
2011
2011
Controlling viewpoint from markerless head tracking in an immersive ball game using a commodity depth-based camera
We present the use of commodity depth-based cameras to control viewpoint from passive unencumbered head tracking. This allowed… 
2008
2008
Mapping short DNA sequencing reads and variants calling using mapping quality scores ( Supplementary Text )
In this supplement text, a letter in uppercase indicates a random variable, whereas a letter in lowercase represents a constant… 
2005
2005
Technology: A genome sequencing center in every lab
in a small number of highlyautomated industrial genome sequencingcenters. One upshot of the human gen-ome project is the future… 
2005
2005
Table 4, Reported rates (per 1,000 patient days) of adverse drug events (ADEs) and alerts by service: RMEES and PHRED
2004
2004
A fuzzy confidence value for DNA bases
A novel approach is presented for determining confidence values for bases called in DNA sequencing. The approach employs fuzzy… 
2003
2003
DNA SEQUENCES BASE CALLING BY PHRED: ERROR PATTERN ANALYSIS Prosdocimi¹,
PHRED is the most frequently used base caller algorithm in genome projects. An interesting point on PHRED utilization is the fact… 
1981
1981
A Knowledge-Based Approach to Language Processing: A Progress Report
We present a model of natural language use meant to encompass the language-specific aspects of understanding and production. The… 
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