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Base calling

Base calling is the process of assigning bases (nucleobases) to chromatogram peaks. One computer program for accomplishing this job is Phred base… 
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Bioinformatics
Phred base calling

Papers overview

Semantic Scholar uses AI to extract papers important to this topic.
2018
2018
The evaluation of in-field whole genome sequencing using the minION™ nanopore sequencer for forensic DNA applications
In-field whole genome sequencing has been made possible by the introduction of the MinION™ DNA sequencer by Oxford Nanopore… 
2017
2017
Embedded CMOS bioinformatics for nanopore sequencers
DNA sequencing is quickly evolving into a mobile technology with a need for power efficient compute services. This paper… 
2015
2015
MEEPTOOLS: a maximum expected error based FASTQ read filtering and trimming toolkit
Next generation sequencing technology rapidly produces massive volume of data and quality control of this sequencing data is… 
2014
2014
Caractérisation moléculaire des formes métastatiques de carcinome médullaire de la thyroïde
Le carcinome medullaire de la thyroide (CMT) est une tumeur neuroendocrine rare, se developpant a partir des cellules secretant… 
Review
2014
Review
2014
Genotype Calling and Haplotype Phasing from Next Generation Sequencing Data
In this chapter, we will review current statistical and computational approaches for genotype calling and haplotype phasing from… 
2013
2013
Message passing algorithm for inferring consensus sequence from next-generation sequencing data
In order to determine an individual's DNA sequence, sequencing platforms often employ shotgun sequencing where multiple identical… 
2012
2012
Development of novel microsatellite markers for a specialist species of Lepidoptera, Boloria aquilonaris (Nymphalidae), based on 454 sequences
Microsatellites are the most common markers used in population and conservation genetic studies. However, their isola- tion is… 
2010
2010
Model-based sequential base calling for Illumina sequencing
In this paper, we study the efficacy of a model-based base-calling approach for Illumina's sequencing platforms. In particular… 
2009
2009
POLISHER: A tool for using ultra short reads in genome sequence improvement
  • 2009
  • Corpus ID: 165584222
Author(s): Foster, Brian; LaButti, Kurt; Trong, Stephan; Han, Cliff; Brettin, Tom; Lapidus, Alla 
2000
2000
Sequencing of β 2-Adreno-ceptor Gene PCR Products Using Taq BigDye Terminator Chemistry Results in Inaccurate Base Calling
2.Merril, C.R., D. Goldman, S.A. Sedman and M.H. Ebert. 1981. Ultrasensitive stain for proteins in polyacrylamide gels shows… 
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