Multiple sequence alignment

Known as: MSA, Multiple alignment 
A multiple sequence alignment (MSA) is a sequence alignment of three or more biological sequences, generally protein, DNA, or RNA. In many cases, the… (More)
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Highly Cited
2010
Highly Cited
2010
SUMMARY Multiple sequence alignment (MSA) is an important step in comparative sequence analyses. Parallelization is a key… (More)
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Highly Cited
2006
Highly Cited
2006
Phylogenies are often thought to be more dependent upon the specifics of the sequence alignment rather than on the method of… (More)
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Highly Cited
2004
Highly Cited
2004
In a previous paper, we introduced MUSCLE, a new program for creating multiple alignments of protein sequences, giving a brief… (More)
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Highly Cited
2004
Highly Cited
2004
We describe MUSCLE, a new computer program for creating multiple alignments of protein sequences. Elements of the algorithm… (More)
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Highly Cited
2003
Highly Cited
2003
The Clustal series of programs are widely used in molecular biology for the multiple alignment of both nucleic acid and protein… (More)
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Highly Cited
2002
Highly Cited
2002
MOTIVATION Progressive Multiple Sequence Alignment (MSA) methods depend on reducing an MSA to a linear profile for each alignment… (More)
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Highly Cited
2002
Highly Cited
2002
An important component of any generation system is the mapping dictionary, a lexicon of elementary semantic expressions and… (More)
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Highly Cited
1994
Highly Cited
1994
We study the computational complexity of two popular problems in multiple sequence alignment: multiple alignment with SP-score… (More)
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Highly Cited
1994
Highly Cited
1994
Multiple sequence alignment is a useful technique for studying molecular evolution and analyzing structure-sequence relationships… (More)
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Highly Cited
1992
Highly Cited
1992
The CLUSTAL package of multiple sequence alignment programs has been completely rewritten and many new features added. The new… (More)
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