DNA binding site

Known as: DNA-binding site, Transcription factor binding site, Transcription factor-binding site 
DNA binding sites are a type of binding site found in DNA where other molecules may bind. DNA binding sites are distinct from other binding sites in… (More)
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13 relations
BioinformaticsCollecTFConsensus sequenceGenBank
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Papers overview

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Highly Cited
2009
Highly Cited
2009
DNA binding site sequence directs glucocorticoid receptor structure and activity.
Genes are not simply turned on or off, but instead their expression is fine-tuned to meet the needs of a cell. How genes are… (More)
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Highly Cited
2007
Highly Cited
2007
STAMP: a web tool for exploring DNA-binding motif similarities
STAMP is a newly developed web server that is designed to support the study of DNA-binding motifs. STAMP may be used to query… (More)
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Highly Cited
2005
Highly Cited
2005
MatInspector and beyond: promoter analysis based on transcription factor binding sites
MOTIVATION Promoter analysis is an essential step on the way to identify regulatory networks. A prerequisite for successful… (More)
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Highly Cited
2005
Highly Cited
2005
Q-SiteFinder: an energy-based method for the prediction of protein-ligand binding sites
MOTIVATION Identifying the location of ligand binding sites on a protein is of fundamental importance for a range of applications… (More)
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Highly Cited
2004
Highly Cited
2004
JASPAR: an open-access database for eukaryotic transcription factor binding profiles
The analysis of regulatory regions in genome sequences is strongly based on the detection of potential transcription factor… (More)
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Highly Cited
2004
Highly Cited
2004
PSSM-based prediction of DNA binding sites in proteins
Detection of DNA-binding sites in proteins is of enormous interest for technologies targeting gene regulation and manipulation… (More)
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Highly Cited
2003
Highly Cited
2003
Modeling dependencies in protein-DNA binding sites
The availability of whole genome sequences and high-throughput genomic assays opens the door for in silico analysis of… (More)
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Review
2000
Review
2000
DNA binding sites: representation and discovery
The purpose of this article is to provide a brief history of the development and application of computer algorithms for the… (More)
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Highly Cited
1996
Highly Cited
1996
TRANSFAC: a database on transcription factors and their DNA binding sites
TRANSFAC is a database about eukaryotic transcription regulating DNA sequence elements and the transcription factors binding to… (More)
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Highly Cited
1995
Highly Cited
1995
Ethylene-inducible DNA binding proteins that interact with an ethylene-responsive element.
We demonstrated that the GCC box, which is an 11-bp sequence (TAAGAGCCGCC) conserved in the 5' upstream region of ethylene… (More)
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