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transcription factor binding
Known as:
TF binding
Interacting selectively and non-covalently with a transcription factor, any protein required to initiate or regulate transcription. [ISBN:0198506732]
National Institutes of Health
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cytoplasmic sequestering of transcription factor
Papers overview
Semantic Scholar uses AI to extract papers important to this topic.
2014
2014
SNP@lincTFBS: An Integrated Database of Polymorphisms in Human LincRNA Transcription Factor Binding Sites
Shangwei Ning
,
Zuxianglan Zhao
,
+7 authors
Xia Li
PLoS ONE
2014
Corpus ID: 13632260
Large intergenic non-coding RNAs (lincRNAs) are a new class of functional transcripts, and aberrant expression of lincRNAs was…
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2014
2014
PolyaPeak: Detecting Transcription Factor Binding Sites from ChIP-seq Using Peak Shape Information
Hao Wu
,
Hongkai Ji
PLoS ONE
2014
Corpus ID: 7119276
ChIP-seq is a powerful technology for detecting genomic regions where a protein of interest interacts with DNA. ChIP-seq data for…
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2013
2013
dPeak: High Resolution Identification of Transcription Factor Binding Sites from PET and SET ChIP-Seq Data
Dongjun Chung
,
D. Park
,
+4 authors
S. Keleş
PLoS Comput. Biol.
2013
Corpus ID: 10669784
Chromatin immunoprecipitation followed by high throughput sequencing (ChIP-Seq) has been successfully used for genome-wide…
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2013
2013
A Structural-Based Strategy for Recognition of Transcription Factor Binding Sites
Beisi Xu
,
Dustin E. Schones
,
Yongmei Wang
,
Haojun Liang
,
Guohui Li
PLoS ONE
2013
Corpus ID: 13393041
Scanning through genomes for potential transcription factor binding sites (TFBSs) is becoming increasingly important in this post…
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2012
2012
Assessment of Algorithms for Inferring Positional Weight Matrix Motifs of Transcription Factor Binding Sites Using Protein Binding Microarray Data
Yaron Orenstein
,
Chaim Linhart
,
R. Shamir
PLoS ONE
2012
Corpus ID: 588007
The new technology of protein binding microarrays (PBMs) allows simultaneous measurement of the binding intensities of a…
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2011
2011
Evidence of association between Nucleosome Occupancy and the Evolution of Transcription Factor Binding Sites in Yeast
Krishna B. S. Swamy
,
W. Chu
,
Chun-Yi Wang
,
Huai-Kuang Tsai
,
Daryi Wang
BMC Evolutionary Biology
2011
Corpus ID: 2536955
BackgroundDivergence of transcription factor binding sites is considered to be an important source of regulatory evolution. The…
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2009
2009
Evolution of Transcription Factor Binding Sites in Mammalian Gene Regulatory Regions: Handling Counterintuitive Results
James E. Balmer
,
R. Blomhoff
Journal of Molecular Evolution
2009
Corpus ID: 24522584
The remodeling of transcription factor binding sites is one of the major engines of evolutionary change, yet almost all available…
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2008
2008
Prediction of cardiac transcription networks based on molecular data and complex clinical phenotypes.
Martje Toenjes
,
M. Schueler
,
+5 authors
S. Sperling
Molecular Biosystems
2008
Corpus ID: 9383809
We present an integrative approach combining sophisticated techniques to construct cardiac gene regulatory networks based on…
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2007
2007
Incorporating evolution of transcription factor binding sites into annotated alignments
A. Bais
,
Steffen Grossmann
,
M. Vingron
Journal of Biosciences
2007
Corpus ID: 33457429
Identifying transcription factor binding sites (TFBSs) is essential to elucidate putative regulatory mechanisms. A common…
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1987
1987
Unrelated leader sequences can efficiently promote human tRNA gene transcription.
G. Arnold
,
H. Gross
Gene
1987
Corpus ID: 12540539
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