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YYDPETGTWY

Known as: CLN025 
 
National Institutes of Health

Topic mentions per year

Topic mentions per year

2010-2016
012320102016

Related topics

Related topics

1 relation

Broader (1)

Oligopeptides

Related mentions per year

Related mentions per year

1954-2018
1960198020002020
YYDPETGTWY
Oligopeptides

Papers overview

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2017
2017
Modeling the mechanism of CLN025 beta-hairpin formation.
Beta-hairpins are substructures found in proteins that can lend insight into more complex systems. Furthermore, the folding of… (More)
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2017
2017
How fast fast-folding proteins fold in silico.
In reported microcanonical molecular dynamics simulations, fast-folding proteins CLN025 and Trp-cage autonomously folded to… (More)
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2017
2017
Modeling the Mechanism of CLN025Beta-Hairpin Formation
  • Keri A. McKiernana, Brooke E. Husica, Vijay S. Pandea
  • 2017
M dynamics (MD) simulations employ a potential energy function, referred to as a force field, in order to sample the free energy… (More)
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2016
2016
FF12MC: A revised AMBER forcefield and new protein simulation protocol
Specialized to simulate proteins in molecular dynamics (MD) simulations with explicit solvation, FF12MC is a combination of a new… (More)
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2014
2014
Low-mass molecular dynamics simulation: a simple and generic technique to enhance configurational sampling.
CLN025 is one of the smallest fast-folding proteins. Until now it has not been reported that CLN025 can autonomously fold to its… (More)
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2012
2012
Raising the speed limit for β-hairpin formation.
Understanding the folding of the β-hairpin is a crucial step in studying how β-rich proteins fold. We have studied CLN025, an… (More)
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2011
2011
Molecular dynamics simulation exploration of unfolding and refolding of a ten-amino acid miniprotein
Steered molecular dynamics simulations are performed to explore the unfolding and refolding processes of CLN025, a 10-residue… (More)
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2011
2011
Computational study of the free energy landscape of the miniprotein CLN025 in explicit and implicit solvent.
The prediction capabilities of atomistic simulations of peptides are hampered by different difficulties, including the… (More)
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2010
2010
Molecular dynamics analysis of the conformations of a beta-hairpin miniprotein.
Molecular dynamics simulations of a beta-hairpin miniprotein, CLN025, were performed to examine the conformational stability of… (More)
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2010
2010
Characterizing protein energy landscape by self-learning multiscale simulations: application to a designed β-hairpin.
Characterizing the energy landscape of proteins at atomic resolution is still a very challenging problem, since it simultaneously… (More)
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