Verlet list

Known as: Neighbor list 
A Verlet list (named after Loup Verlet) is a data structure in molecular dynamics simulations to efficiently maintain a list of all particles within… (More)
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Topic mentions per year

Topic mentions per year

1977-2018
05101519772018

Papers overview

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Review
2012
Review
2012
Understanding protein and RNA biomolecular folding and assembly processes have important applications because misfolding is… (More)
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2012
2012
Verlet lists, which are commonly used in many particle-based simulations, are not suited for modern, shared-memory parallel… (More)
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2010
2010
A new method for efficient modeling of macromolecular systems with symmetries is presented. The method is based on a hierarchical… (More)
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2010
2010
We propose an automatic generation scheme of neighboring BS (Base Station) lists, utilized by an MS (Mobile Station) to determine… (More)
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2006
2006
The paper presents the concept of an adaptive neighbor list management mechanism that has as objective to control the quality of… (More)
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2004
2004
Aleksandar Donev, 2 Salvatore Torquato, 2, 3, ∗ and Frank H. Stillinger Program in Applied and Computational Mathematics… (More)
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2004
2004
An improved neighbor list algorithm is proposed to reduce unnecessary interatomic distance calculations in molecular simulations… (More)
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2004
2004
We apply the algorithm presented in the first part of this series of papers to systems of hard ellipses and ellipsoids. The… (More)
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1994
1994
This video shows an animation of an algorithm due to the authors [2] for solving the fixed-radius all-nearest-neighbors problem… (More)
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