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Smith–Waterman algorithm
Known as:
Smith algorithm
, Local alignment
, Smith-Waterman
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The Smith–Waterman algorithm performs local sequence alignment; that is, for determining similar regions between two strings or nucleotide or protein…
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Related topics
Related topics
33 relations
Approximate string matching
BLAST
Backtracking
BioJava
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Broader (2)
Computational phylogenetics
Dynamic programming
Papers overview
Semantic Scholar uses AI to extract papers important to this topic.
2014
2014
Sunsafe bryophytes: photoprotection from excess and damaging solar radiation
S. Robinson
,
M. Waterman
2014
Corpus ID: 41206953
Whilst light is essential for photosynthesis and development of plants, both excess photosynthetically active radiation and…
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2008
2008
Hardware implementation of the Smith-Waterman Algorithm using Recursive Variable Expansion
L. Hasan
,
Z. Al-Ars
,
Z. Nawaz
,
K. Bertels
International Design and Test Workshop
2008
Corpus ID: 14014315
In this paper we adapted a novel approach for accelerating the Smith-Waterman (S-W) algorithm using Recursive Variable Expansion…
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2008
2008
Acceleration of Smith-Waterman using Recursive Variable Expansion
Z. Nawaz
,
Z. Al-Ars
,
K. Bertels
,
Mudassir Shabbir
11th EUROMICRO Conference on Digital System…
2008
Corpus ID: 8990492
The Smith-Waterman (SW) algorithm is a local sequence alignment algorithm that attempts to align two biological sequences of…
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2007
2007
Performance Improvement of the Smith-Waterman Algorithm
Laiq Hasan
,
Z. Al-Ars
2007
Corpus ID: 18040112
Efficient sequence alignment is one of the most important and challenging activities in bioinformatics. Many algorithms have been…
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2006
2006
Efficient Cell Designs for Systolic Smith-Waterman Implementations
Mustafa Gök
,
Çaglar Yilmaz
International Conference on Field-Programmable…
2006
Corpus ID: 16795460
Smith-Waterman algorithm is used to search bioinformatics databases. The systolic array implementations of this algorithm can…
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2005
2005
Carbon nanotube thin films with ordered structures
C. Du
,
J. Yeh
,
N. Pan
2005
Corpus ID: 55566776
Carbon nanotube thin films with ordered structures have been developed from a highly concentrated suspension of nanotubes; this…
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Review
1976
Review
1976
In situ experiments on the dissolved and colloidal state of iron in an acid bog lake1
J. Koenings
1976
Corpus ID: 55895257
A sampler and an anaJytica1 and characterization scheme were developed to investigate the chemical and physical state of iron in…
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1975
1975
Simplifications for the Analysis of Interdigital Surface-Wave Devices
G. Matthaei
,
D. Wong
,
B. O'Shaughnessy
IEEE Transactions on Sonics and Ultrasonics
1975
Corpus ID: 40758220
Equivalent circuits for interdigital transducers were previously published which predict identical terminal properties as those…
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1957
1957
Polarized Light and the Orientation of Two Marine Crustacea
Richard Bainbridge
,
T. Waterman
1957
Corpus ID: 27842718
1. Quantitative experiments are described, designed to test the hypothesis that underwater polarized light is used for…
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Highly Cited
1944
Highly Cited
1944
l-AMINO ACID OXIDASE OF PROTEUS VULGARIS
P. Stumpf
,
D. E. Green
1944
Corpus ID: 51822470
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