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SBML
Known as:
Systems biology markup language
The Systems Biology Markup Language (SBML) is a representation format, based on XML, for communicating and storing computational models of biological…
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BioModels Database
BioPAX
BioTapestry
C++
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Broader (1)
Systems biology
Papers overview
Semantic Scholar uses AI to extract papers important to this topic.
2013
2013
Rich Linking in a Digital Library of Full-Text Scientific Research Reports
R. Allen
2013
Corpus ID: 53793745
With interactive full-text documents, there are opportunities to take advantage of the structure in scientific research reports…
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2008
2008
Building in-silico pathway SBML models from heterogeneous sources
Ioannis Kanaris
,
K. Moutselos
,
A. Chatziioannou
,
Ilias Maglogiannis
,
F. Kolisis
International Conferences on Biological…
2008
Corpus ID: 29577605
The recent revolutionary developments concerning the high throughput (-omics) measuring techniques in life sciences is expediting…
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2008
2008
From BlenX to chemical reactions via SBML
R. Larcher
,
C. Priami
2008
Corpus ID: 55112041
Recently process calculi have been used to model biological systems. We use the process calculi-based language BlenX to develop…
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2007
2007
XML Processing in Logic Programming
Jorge Coelho
2007
Corpus ID: 61655468
The main goal of this thesis is to develop a new approach to XML processing based in Logic Programming by exploring the natural…
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2007
2007
A Problem-Solving Environment for Biological Network Informatics: Bio-Spice
P. Lincoln
,
Charles Pedersen
2007
Corpus ID: 60009119
Abstract : The integration of multiple bioinformatics tools into an integrated suite poses many software engineering, social, and…
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2006
2006
GO 기반의 SBML 문서 관리 및 질의 처리기
승혜 정
,
태성 정
,
태계 김
,
경랑 김
,
완섭 조
2006
Corpus ID: 195900299
본 논문에서는 SBML문서를 효율적으로 저장관리 할 수 있는 Gene Ontology 기반의 SBML 문서관리 시스템을 제안한다. SBML…
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2005
2005
A Tool for Using the SBML Format to Represent P Systems which Model Biological Reaction Networks
Isabel Chamorro
,
Juan Chamorro
,
F. R. Campero
2005
Corpus ID: 14439796
Type Data Engine of Simulator GUI Component Model Component Fig. 1. Hierarchical structure and relations among the different…
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2004
2004
A Parallel Implementation of Gillespie's Direct Method
Azmi B. M. Ridwan
,
A. Krishnan
,
P. Dhar
International Conference on Conceptual Structures
2004
Corpus ID: 19775831
Gillespie’s Direct Method Algorithm (1977), is a well-known exact stochastic algorithm for simulating coupled reactions that…
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2003
2003
Sixth Annual Bio-ontologies Meeting Brisbane, 2003 Contents 1 Programme 5 2 Indexing Medline with Go 7
Robin Mcentire
2003
Corpus ID: 15483280
2002
2002
XML Pathway File Conversion between Genomic Object Net and SBML
M. Nakano
,
Hironori Kitakaze
,
H. Matsuno
,
S. Miyano
2002
Corpus ID: 18067181
Recently, the importance of biosimulation softwares in systems biology has been emphasized and received considerable attentions…
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