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BioPAX

Known as: SBPAX 
BioPAX (Biological Pathway Exchange) is a RDF/OWL-basedstandard language to represent biological pathwaysat the molecular and cellular level. Its… 
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Related topics

Related topics

24 relations
BioModels DatabaseCOMBINEConsensusPathDBFlux balance analysis

Broader (2)

BioinformaticsSystems biology

Papers overview

Semantic Scholar uses AI to extract papers important to this topic.
2013
2013
Looking into Reactome through Biopax Lens
In order to understand cell behavior under different conditions, the computational simulation of biological pathways is of great… 
2013
2013
Building Executable Biological Pathway Models Automatically from BioPAX
The amount of biological data exposed in semantic formats is steadily increasing. In particular, pathway information (a model of… 
2010
2010
Java DOM Parsers to Convert KGML into SBML and BioPAX Common Exchange Formats
Integrating various pathway data collections to create new biological knowledge is a challenge, for which novel computational… 
Review
2009
Review
2009
CONDITIONAL PATHWAY INTEGRATION
ion, e.g. metabolism, signal transduction, and regulation, each providing a partial perspective on the biological issues at hand… 
2007
2007
BIOPAX REPORT SPRING 2007
In July 2004, the Department of Energy (DOE) allocated funds in support of the development of A Data Exchange Format for… 
2007
2007
Hey! You Got Imperative in My Declarative, or A Mashup Made in Heaven: Making OWL friendlier with Javascript
  • A. Ruttenberg
  • OWL: Experiences and Directions
  • 2007
  • Corpus ID: 1661246
A fluid control system for cleaning exhaust gases of an internal combustion engine by injecting additional air into the exhaust… 
2006
2006
A semantic web approach to biological pathway data reasoning and integration
2006
2006
Data Integration with BioPAX Pathway Datasets for Automated Navigation
The emergence of biological pathway datasets in BioPAX format provides a standard way to exchange pathway datasets and new ways… 
2004
2004
XML representations of pathway data : a comparison
Standardisation and integration of pathway data is currently an interesting topic within bioinformatics with several consortia,e… 
2003
2003
Sixth Annual Bio-ontologies Meeting Brisbane, 2003 Contents 1 Programme 5 2 Indexing Medline with Go 7
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