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BioPAX
Known as:
SBPAX
BioPAX (Biological Pathway Exchange) is a RDF/OWL-basedstandard language to represent biological pathwaysat the molecular and cellular level. Its…
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24 relations
BioModels Database
COMBINE
ConsensusPathDB
Flux balance analysis
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Broader (2)
Bioinformatics
Systems biology
Papers overview
Semantic Scholar uses AI to extract papers important to this topic.
2013
2013
Looking into Reactome through Biopax Lens
Laleh Kazemzadeh
,
Helena F. Deus
,
M. Dumontier
,
F. Barry
China Semantic Web Symposium
2013
Corpus ID: 8382619
In order to understand cell behavior under different conditions, the computational simulation of biological pathways is of great…
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2013
2013
Building Executable Biological Pathway Models Automatically from BioPAX
T. Willemsen
,
K. Feenstra
,
Paul T. Groth
LISC@ISWC
2013
Corpus ID: 6742289
The amount of biological data exposed in semantic formats is steadily increasing. In particular, pathway information (a model of…
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2013
2013
Pattern search in BioPAX models ¨ Ozg¨
I. Rodchenkov
,
C. Sander
,
E. Demir
2013
Corpus ID: 63569799
Motivation: BioPAX is a standard language for representing complex cellular processes, including metabolic networks, signal…
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Review
2013
Review
2013
HINO: BFO-aligned ontology representation of human molecular interactions and pathways
Zuoshuang Xiang
,
Y. He
International Conference on Biomedical Ontology
2013
Corpus ID: 8136930
Reactome is a manually-curated, peer-reviewed knowledgebase of human pathways and processes. As a standard pathway data exchange…
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2008
2008
Problems and Solutions in the Integration of biomedical knowledge bases
Luca Corradi
,
M. Fato
,
+5 authors
A. Schenone
2008
Corpus ID: 16202220
The problem of integrating different biomedical knowledge bases has to face lots of problems than are even more difficult in the…
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2008
2008
Ontology Design Principles and Normalization Techniques in the Web
Xiaoshu Wang
,
Jonas S. Almeida
,
Arlindo L. Oliveira
Data Integration in the Life Sciences
2008
Corpus ID: 43325281
The fundamental issue of knowledge sharing in the web is the ability to share the ontological constrains associated with the…
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2007
2007
Hey! You Got Imperative in My Declarative, or A Mashup Made in Heaven: Making OWL friendlier with Javascript
A. Ruttenberg
OWL: Experiences and Directions
2007
Corpus ID: 1661246
A fluid control system for cleaning exhaust gases of an internal combustion engine by injecting additional air into the exhaust…
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2006
2006
Data Integration with BioPAX Pathway Datasets for Automated Navigation
Keyuan Jiang
International Conference on Bioinformatics…
2006
Corpus ID: 16320266
The emergence of biological pathway datasets in BioPAX format provides a standard way to exchange pathway datasets and new ways…
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Review
2006
Review
2006
Bioinformatics in the human interactome project
Alfonso Valencia
Bioinform.
2006
Corpus ID: 28773580
Bioinformatics in the human interactome project 'In the early days of the Human Interactome Project, a meeting was organized…
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2003
2003
Sixth Annual Bio-ontologies Meeting Brisbane, 2003 Contents 1 Programme 5 2 Indexing Medline with Go 7
Robin Mcentire
2003
Corpus ID: 15483280