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Protein Families Database

Known as: Pfam 
Pfam is a large collection of multiple sequence alignments and hidden Markov models covering many common protein domains and families. For each… 
National Institutes of Health

Papers overview

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Highly Cited
2015
Highly Cited
2015
De novo transcriptome sequencing of Agropyron cristatum to identify available gene resources for the enhancement of wheat.
2015
2015
Evolutionary insights from de novo transcriptome assembly and SNP discovery in California white oaks
Reference transcriptomes provide valuable resources for understanding evolution within and among species. We de novo assembled… 
Highly Cited
2014
Highly Cited
2014
AIDA: ab initio domain assembly server
AIDA: ab initio domain assembly server, available at http://ffas.burnham.org/AIDA/ is a tool that can identify domains in multi… 
2014
2014
Transcriptome resources for the frogs Lithobates clamitans and Pseudacris regilla, emphasizing antimicrobial peptides and conserved loci for phylogenetics
We developed genetic resources for two North American frogs, Lithobates clamitans and Pseudacris regilla, widespread native… 
2013
2013
Sequencing and De Novo Assembly of the Western Tarnished Plant Bug (Lygus hesperus) Transcriptome
Background Mirid plant bugs (Hemiptera: Miridae) are economically important insect pests of many crops worldwide. The western… 
2012
2012
Analysis of the nuclear proteome of the resurrection plant Xerophyta viscosa in response to dehydration stress using iTRAQ with 2DLC and tandem mass spectrometry.
Review
2012
Review
2012
Structural genomics plucks high-hanging membrane proteins.
2012
2012
Solution NMR structure of yeast succinate dehydrogenase flavinylation factor Sdh5 reveals a putative Sdh1 binding site.
The yeast mitochondrial protein Sdh5 is required for the covalent attachment of flavin adenine dinucleotide (FAD) to protein Sdh1… 
2006
2006
Computer‐aided NMR assay for detecting natively folded structural domains
Structural genomics projects require strategies for rapidly recognizing protein sequences appropriate for routine structure… 
2004
2004
A novel aspartic proteinase is targeted to the secretory pathway and to the vacuole in the moss Physcomitrella patens.
In seed plants aspartic proteases (APs) are known to reside in storage vacuoles. Targeting to this compartment is provoked by a… 
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