Protein Data Bank (file format)

Known as: .pdb, PDB, Pdb file format 
The PDB file format was invented in 1976 as a human-readable file that would allow researchers to exchange protein coordinates through a database… (More)
Wikipedia

Topic mentions per year

Topic mentions per year

1995-2017
024619952017

Papers overview

Semantic Scholar uses AI to extract papers important to this topic.
2016
2016
Many applications, such as protein design, homology modeling, flexible docking, etc. require the prediction of a protein's… (More)
  • figure 1
  • figure 2
  • figure 3
  • figure 4
  • table 1
Is this relevant?
2013
2013
We created SynSysNet, available online at http://bioinformatics.charite.de/synsysnet, to provide a platform that creates a… (More)
Is this relevant?
2007
2007
The program HBAT is a tool to automate the analysis of potential hydrogen bonds and similar type of weak interactions like… (More)
Is this relevant?
Highly Cited
2006
Highly Cited
2006
CUPSAT (Cologne University Protein Stability Analysis Tool) is a web tool to analyse and predict protein stability changes upon… (More)
  • figure 1
  • figure 2
Is this relevant?
2005
2005
Protein surface regions with similar physicochemical properties and shapes may perform similar functions and bind similar binding… (More)
  • figure 1
Is this relevant?
Highly Cited
2004
Highly Cited
2004
Normal mode analysis (NMA) is a powerful tool for predicting the possible movements of a given macromolecule. It has been shown… (More)
  • figure 1
Is this relevant?
Highly Cited
2004
Highly Cited
2004
STRIDE is a software tool for secondary structure assignment from atomic resolution protein structures. It implements a knowledge… (More)
  • figure 1
Is this relevant?
2004
2004
We have developed the first computer program for determining the coordinates of heterojunctions between two arbitrary carbon… (More)
Is this relevant?
Highly Cited
2003
Highly Cited
2003
SUMMARY ModLoop is a web server for automated modeling of loops in protein structures. The input is the atomic coordinates of the… (More)
  • figure 1
Is this relevant?
2003
2003
NCI is a server for the identification of non-canonical interactions in protein structures. These interactions, which include N-H… (More)
  • figure 1
  • table 1
  • figure 2
  • figure 3
Is this relevant?