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Protein Data Bank (file format)

Known as: .pdb, PDB, PDB file format 
The PDB file format was invented in 1976 as a human-readable file that would allow researchers to exchange protein coordinates through a database… 
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AmiraBiopythonBsoftCCP4 (file format)

Broader (1)

Computational chemistry

Papers overview

Semantic Scholar uses AI to extract papers important to this topic.
2015
2015
In-Silico Drug Design through Protein-Ligand Interaction Studies of Snake Venom Peptides
Toxins have evolved in plants, animals and microbes multiple times as part of defensive and/or prey capture strategies. Peptide… 
2012
2012
Overcoming the limitations of PDB format
The Protein Data Bank is a repository for the 3-D structural data of large biological molecules, such as proteins and nucleic… 
2011
2011
Estudio mecanocuántico, docking y dinámica molecular de tioazúcares como inhibidores de la proteína fucosidasa: algoritmos para el análisis conformacional y programa para el cálculo de constantes de…
En esta tesis se hace un estudio computacional (incluyendo calculos ab initio y DFT) de varios tioazucares representativos, con… 
2011
2011
The first Results page of a comparison
Copyright information: Taken from "pdbFun: mass selection and fast comparison of annotated PDB residues"Nucleic Acids Research… 
2010
2010
Bacterio-Informatics: Identifying the cause of Hansen's disease and establish a remedy for the same
Leprosy or Hansen disease is a slowly progressive infection caused by Mycobacterium leprae , affecting the skin and peripheral… 
2009
2009
X-ray absorption spectroscopy investigations into the stability and activity of fuel cell electrocatalysts
OF DISSERTATION Submitted in partial fulfillment of the requirement s for the degree of Doctor of Philosophy in Chemistry in the… 
2009
2009
LatFit - Manual
1 Description LatFit allows the conversion of a protein’s full atom structure representation in Protein Data Bank (PDB) format… 
2004
2004
Structure-based design of hyaluronidase inhibitors
Hyaluronan and hyaluronidases have been used in several medical fields for many years and some hyaluronidases play a role in, e.g… 
Review
2000
Review
2000
Topology { based protein structure comparison using a patterndiscovery technique ( Extended abstract )
Overview We describe the design and implementation of a fast topology{based method for protein structure comparison. The approach… 
Review
1996
Review
1996
PDBtool: An interactive browser and geometry checker for protein structures
PDBtool version 1.0 is an interactive UNIX and X/Motif-based computer program for investigating the three-dimensional (3D… 
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