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PathVisio

Known as: PathVisioRPC 
PathVisio is a free open-source pathway analysis and drawing software. It allows drawing, editing and analysing biological pathways.Visualization of… 
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Broader (2)

BioinformaticsSystems biology
CytoscapeJavaOSGi

Papers overview

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2018
2018
Providing gene-to-variant and variant-to-gene database identifier mappings to use with BridgeDb mapping services
Database identifier mapping services are important to make database information interoperable. BridgeDb offers such a service… 
2016
2016
Biological pathways identification of breast cancer cell lines transcriptome by Pathvisio software
2014
2014
Pathway Profiling of Human Tissues - Connecting PathVisio to Expression Atlas
2014
2014
SBML Importer Plugin for PathVisio
Review
2014
Review
2014
Curation, Visualization and Analysis of Biological Pathways
Pathway diagrams are found everywhere: in textbooks, in review articles, on posters and on whiteboards. Their utility to… 
2013
2013
Epigenetically active drugs target metabolic gene-regulation in leukemic cells
Background: Up-regulation of energy metabolism is a key feature of proliferating cells from cancers and leukemias. Thus… 
2012
2012
Flexible Integration and Visualisation of Drosophila Melanogaster Datasets
The challenge in bioinformatics is not integration by itself, which could be achieved with ad-hoc scripting, but to do so in a… 
2012
2012
Pathway curation: from isolated pathway knowledge to search-click-and-grow.
We have developed a plugin called PathVisio Loom, which provides a framework for knowledge aggregation through menu guided… 
2012
2012
Mapping plant metabolic pathways using PathVisio 2
2011
2011
R tools for MicroRNA pathway analysis
miRNAs visualized in the pathway Possible gene targets This work is a combined effort by the exchange students of Manipal…