Skip to search formSkip to main contentSkip to account menu

Cytoscape

Cytoscape is an open source bioinformatics software platform for visualizing molecular interaction networks and integrating with gene expression… 
Wikipedia (opens in a new tab)

Related topics

Related topics

33 relations
BONDBioMartBioinformaticsBiological network inference

Broader (1)

Systems biology

Papers overview

Semantic Scholar uses AI to extract papers important to this topic.
Review
2015
Review
2015
Data-driven Biomarker and Drug Discovery using Network-based Approach
An increasing body of large-scale genomic profiling data has been being generated on many diseases including cancers and on a… 
2015
2015
A Visual Ontology Management System for Handling, Integrating and Enriching Semantic Repositories
This paper presents a prototype system for managing ontological data from RDF semantic repositories, via an intuitive, graph… 
2015
2015
Visualizing Regulation in Rule-based Models
Rule-based modeling is a powerful way to model kinetic interactions in biochemical systems. Rules enable a precise encoding of… 
2014
2014
Etude de quatre lichens marins, maritime ou terrestre et des bactéries associées : Evaluation de la diversité bactérienne et recherche de métabolites d’intérêt
L'efficacite des antibiotiques actuellement utilises dans le monde entier est en baisse a un rythme inquietant. La majorite des… 
2014
2014
A Nanopublication Framework for Biological Networks using Cytoscape.js
We leverage semantic technologies and Cytoscape.js to create a provenance-aware, probabilistic analysis platform for systems… 
2011
2011
Twitter and e-health: A case study of visualizing cancer networks on Twitter
This paper seeks to understand health-related social networks on social media websites. The paper explores fundamental questions… 
2011
2011
Identificación de genes específicos de enfermedad periodontal mediante microarray
2009
2009
PNmerger:a Cytoscape Plugin to Merge Biological Pathways and Protein Interaction Networks
PNmerger (a biological Pathway and protein Network merger) is a java based plugin for the widely used open source Cytoscape… 
2009
2009
Multiple step social structure analysis with Cytoscape
Cytoscape is a popular open source tool for biologists to visualize interaction networks. We find that it offers most of the… 
2007
2007
BiNoM : a Cytoscape plugin for using and analyzing biological networks
BiNoM (BIological NetwOrk Manager) is a Cytoscape plugin, developed to facilitate the manipulation of biological networks… 
By clicking accept or continuing to use the site, you agree to the terms outlined in our Privacy Policy (opens in a new tab), Terms of Service (opens in a new tab), and Dataset License (opens in a new tab)