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Cytoscape

Cytoscape is an open source bioinformatics software platform for visualizing molecular interaction networks and integrating with gene expression… 
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Related topics

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BONDBioMartBioinformaticsBiological network inference

Broader (1)

Systems biology

Papers overview

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Review
2016
Review
2016
Molecular predictors of response to fulvestrant 1 TransCONFIRM : Identification of a genetic signature of response to fulvestrant in advanced hormone receptor positive breast cancer
  • 2016
  • Corpus ID: 35458158
Purpose: Fulvestrant is an estrogen receptor (ER) antagonist and an approved treatment for metastatic estrogen receptor positive… 
Review
2015
Review
2015
Data-driven Biomarker and Drug Discovery using Network-based Approach
An increasing body of large-scale genomic profiling data has been being generated on many diseases including cancers and on a… 
2015
2015
A Visual Ontology Management System for Handling, Integrating and Enriching Semantic Repositories
This paper presents a prototype system for managing ontological data from RDF semantic repositories, via an intuitive, graph… 
2015
2015
Visualizing Regulation in Rule-based Models
Rule-based modeling is a powerful way to model kinetic interactions in biochemical systems. Rules enable a precise encoding of… 
2014
2014
Etude de quatre lichens marins, maritime ou terrestre et des bactéries associées : Evaluation de la diversité bactérienne et recherche de métabolites d’intérêt
L'efficacite des antibiotiques actuellement utilises dans le monde entier est en baisse a un rythme inquietant. La majorite des… 
2014
2014
A Nanopublication Framework for Biological Networks using Cytoscape.js
We leverage semantic technologies and Cytoscape.js to create a provenance-aware, probabilistic analysis platform for systems… 
2014
2014
REGIONAL POWER GRID ANALYSIS IN A COMPLEX NETWORK TO IMPROVE THE POWER QUALITY
Nowadays need of energy is must. Primary sources, used every day for our livelihood, will not last forever and we will have to… 
2011
2011
Twitter and e-health: A case study of visualizing cancer networks on Twitter
This paper seeks to understand health-related social networks on social media websites. The paper explores fundamental questions… 
2009
2009
Multiple step social structure analysis with Cytoscape
Cytoscape is a popular open source tool for biologists to visualize interaction networks. We find that it offers most of the… 
2007
2007
BiNoM : a Cytoscape plugin for using and analyzing biological networks
BiNoM (BIological NetwOrk Manager) is a Cytoscape plugin, developed to facilitate the manipulation of biological networks… 
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