Cytoscape

Cytoscape is an open source bioinformatics software platform for visualizing molecular interaction networks and integrating with gene expression… (More)
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Highly Cited
2015
Highly Cited
2015
BACKGROUND AND SCOPE Nowadays, centrality analysis has become a principal method for identifying essential proteins in biological… (More)
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Highly Cited
2013
Highly Cited
2013
SUMMARY The CluePedia Cytoscape plugin is a search tool for new markers potentially associated to pathways. CluePedia calculates… (More)
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Highly Cited
2011
Highly Cited
2011
UNLABELLED Cytoscape is a popular bioinformatics package for biological network visualization and data integration. Version 2.8… (More)
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Highly Cited
2011
Highly Cited
2011
In the post-genomic era, the rapid increase in high-throughput data calls for computational tools capable of integrating data of… (More)
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Highly Cited
2010
Highly Cited
2010
UNLABELLED Cytoscape Web is a web-based network visualization tool-modeled after Cytoscape-which is open source, interactive… (More)
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Highly Cited
2010
Highly Cited
2010
UNLABELLED The GeneMANIA Cytoscape plugin brings fast gene function prediction capabilities to the desktop. GeneMANIA identifies… (More)
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Highly Cited
2009
Highly Cited
2009
We have developed ClueGO, an easy to use Cytoscape plug-in that strongly improves biological interpretation of large lists of… (More)
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Highly Cited
2009
Highly Cited
2009
UNLABELLED The MiMI molecular interaction repository integrates data from multiple sources, resolves interactions to standard… (More)
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Highly Cited
2007
Highly Cited
2007
UNLABELLED Cerebral (Cell Region-Based Rendering And Layout) is an open-source Java plugin for the Cytoscape biomolecular… (More)
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Highly Cited
2005
Highly Cited
2005
The Biological Networks Gene Ontology tool (BiNGO) is an open-source Java tool to determine which Gene Ontology (GO) terms are… (More)
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