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Generalized tree alignment

In computational phylogenetics, generalized tree alignment is the problem of producing a multiple sequence alignment and a phylogenetic tree on a set… Expand
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2016
2016
Two commonly used heuristic approaches to the generalized tree alignment problem are compared in the context of phylogenetic… Expand
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2015
2015
We reexamine the deferred path heuristic originally developed by Schwikowski and Vingron in the late 1990s. Given a set of… Expand
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2009
2009
In generalized tree alignment problem, we are given a set S of k biologically related sequences and we are interested in a… Expand
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2006
2006
PCT No. PCT/EP96/01529 Sec. 371 Date Jan. 27, 1998 Sec. 102(e) Date Jan. 27, 1998 PCT Filed Apr. 4, 1996 PCT Pub. No. WO96/32114… Expand
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2000
2000
This paper describes a parallel implementation of a sequence alignment algorithm for biomolecular sequence analysis. It uses… Expand
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1999
1999
This application software system of Tree Alignment and Reconstruction (TAAR) is an X Window based interactive system developed… Expand
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1997
1997
Many multiple alignment methods implicitly or explicitly try to minimize the amount of biological change implied by an alignment… Expand
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1996
1996
A formalization of the multiple sequence alignment problem that emphasizes the problem's evolutionary aspect is the Generalized… Expand
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1996
1996
Many multiple alignment methods implicitly or explicitly try to minimize the amount of biological change implied by an alignment… Expand
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1994
1994
We study the following fundamental problem in computational molecular biology: Given a set of DNA sequences representing some… Expand
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