FASTA

FASTA is a DNA and protein sequence alignment software package first described (as FASTP) by David J. Lipman and William R. Pearson in 1985. Its… (More)
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Papers overview

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2015
2015
The pyfaidx Python module provides memory and time-efficient indexing, subsetting, and in-place modification of subsequences of… (More)
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2014
2014
MOTIVATION The data deluge phenomenon is becoming a serious problem in most genomic centers. To alleviate it, general purpose… (More)
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Review
2014
Review
2014
Non-differentiable and constrained optimization play a key role in machine learning, signal and image processing, communications… (More)
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Highly Cited
2011
Highly Cited
2011
SUMMARY Here, we present PRINSEQ for easy and rapid quality control and data preprocessing of genomic and metagenomic datasets… (More)
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Highly Cited
2010
Highly Cited
2010
The EMBL-EBI provides access to various mainstream sequence analysis applications. These include sequence similarity search… (More)
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Highly Cited
2007
Highly Cited
2007
MSATCOMMANDER is a platform-independent program designed to search for microsatellite arrays, design primers, and tag primers… (More)
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2007
2007
Folksonomies provide a free source of keywords describing web resources, however, these keywords are free form and unstructured… (More)
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Highly Cited
2006
Highly Cited
2006
The OrthoMCL database (http://orthomcl.cbil.upenn.edu) houses ortholog group predictions for 55 species, including 16 bacterial… (More)
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Highly Cited
2004
Highly Cited
2004
Summary: Tandem mass spectra obtained from fragmenting peptide ions contain some peptide sequence specific information, but often… (More)
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Highly Cited
1994
Highly Cited
1994
The wx-K mutation results from the insertion of a copia-like retrotransposon into exon 12 of the maize waxy gene. This… (More)
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