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BioCyc database collection

Known as: BioCyc 
The BioCyc database collection is an assortment of organism specific Pathway/ Genome Databases (PGDBs). They provide reference to genome and… 
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Related topics

Related topics

5 relations
DatabaseGene regulatory networkGeneric Model Organism DatabaseMetaCyc

Papers overview

Semantic Scholar uses AI to extract papers important to this topic.
2013
2013
Agreement assessment of biochemical pathway models by structural analysis of their intersection
In case of model development, it would be an advantage to assess the quality of available models looking for the best one or to… 
2012
2012
Application of string similarity ratio and edit distance in automatic metabolite reconciliation comparing reconstructions and models
Increasing numbers of biochemical network models become available and reuse of these models is becoming more common. As a… 
2010
2010
Probabilistic topic modeling for genomic data interpretation
Recently, the concept of a species containing both core and distributed genes, known as the supra- or pangenome theory, has been… 
2010
2010
IsoKEGG: A logic based system for querying biological pathways in KEGG
Understanding the interaction patterns among a set of biological entities in a pathway is an important exercise because it… 
2008
2008
Familiar Layouts Generation for Metabolic Pathway Graph Visualization
by 
2008
2008
Symmetry of Metabolic Network
Previous studies of properties of metabolic works have mainly focused on the statistic properties of networks, including the… 
2006
2006
PathBank: Web-Based Querying and Visualziation of an Integrated Biological Pathway Database
PathBank is a Web-based query and visualization system for biological pathways using an integrated pathway database. To address… 
2004
2004
Integrating Biopathway Databases for Large-scale Modeling and Simulation
Biopathway databases have been developed, such as KEGG and EcoCyc, that compile interaction structures of biopathways together… 
2003
2003
Objective and subjective relations in data visualization: examples from molecular biological data collections
  • I. Rojdestvenski
  • Proceedings on Seventh International Conference…
  • 2003
  • Corpus ID: 12250998
Natural science is where the objective and the subjective meet. When we build data collections, we want them to reflect the… 
Review
2002
Review
2002
Microbial genomes to metabolism
NATURE REVIEWS | GENETICS VOLUME 3 | OCTOBER 2002 | 733 Microbial genomes to metabolism • http://www.biocyc.org/ The BioCyc web… 
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