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BioCreative

BioCreAtIvE (A critical assessment of text mining methods in molecular biology) consists in a community-wide effort for evaluating information… 
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Broader (2)

BioinformaticsInformation science
Biomedical text miningInformation extractionText mining

Papers overview

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2017
2017
MER: a Minimal Named-Entity Recognition Tagger and Annotation Server
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Review
2017
Review
2017
The BioCreative VI Precision Medicine Track corpus Selection , annotation and curation of protein-protein interactions affected by mutations in scientific literature
The Precision Medicine Track in BioCreative VI aims to bring together the biomedical text mining community for a novel challenge… 
2017
2017
OGER: OntoGene’s Entity Recogniser in the BeCalm TIPS Task
We present OGER, an annotation service built on top of OntoGene’s biomedical entity recognition system, which participates in the… 
2015
2015
The UET-CAM System in the BioCreAtIvE V CDR Task
In this paper, we describe a system developed for the BioCreative V chemical-disease relation (CDR) task. The Disease Named… 
2013
2013
The Gene Ontology Task at BioCreative IV
Gene Ontology (GO) annotation is a common task among model organism database (MOD) groups. It is a very time-consuming and labor… 
Review
2013
Review
2013
BioCreative IV Interactive Task
Fully automated text mining systems promote efficient literature searching, retrieval, and review but are not sufficient to… 
2007
2007
BioText Report for the Second BioCreAtIvE Challenge
This report describes the BioText team participation in the Second BioCreAtIvE Challenge. We focused on the Interaction-Article… 
2006
2006
NLM Anatomical Ontology Alignment System. Results of the 2006 Ontology Alignment Contest
An ontology is a formal representation of a domain modeling the entities in the domain and their relations. When a domain is… 
2004
2004
ProMiner: Organism-specific protein name detection using approximate string matching
were required, (2) disambiguation failed because of missing synonyms, e.g. ”vertebrate” and (3) for several cases the provided… 
2004
2004
Recognition of Protein/Gene Names from Text using an Ensemble of Classifiers and Effective Abbreviation Resolution
In this paper 
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