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Assisted Model Building with Energy Refinement (AMBER)

Known as: AMBER (file format), AMBER (molecular dynamics), Amber (disambiguation) 
Assisted Model Building with Energy Refinement (AMBER) is a family of force fields for molecular dynamics of biomolecules originally developed by… 
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Papers overview

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2015
2015
A remarkable new genus of Mantispidae (Insecta, Neuroptera) from Cretaceous amber of Myanmar and its implications on raptorial foreleg evolution in Mantispidae: A comment
2015
2015
Computing transition paths in multiple-basin proteins with a probabilistic roadmap algorithm guided by structure data
Proteins are macromolecules in perpetual motion, switching between structural states to modulate their function. A detailed… 
2013
2013
Adaptive resolution simulation of salt solutions
We present an adaptive resolution simulation of aqueous salt (NaCl) solutions at ambient conditions using the adaptive resolution… 
2012
2012
First steps toward underactuated human-inspired bipedal robotic walking
This paper presents the first steps toward going from human data to formal controller design to experimental realization in the… 
2009
2009
Mechanical properties of non-reconstructed defective single-wall carbon nanotubes
This paper describes the equivalent homogeneous uniaxial mechanical properties of defective single-wall carbon nanotubes. In… 
2007
2007
EOËPIGYNIA BURMENSIS GEN. AND SP. NOV., AN EARLY CRETACEOUS EUDICOT FLOWER (ANGIOSPERMAE) IN BURMESE AMBER
2007
2007
Minimum BER power allocation for MIMO spatial multiplexing systems
Power allocation for multiple-input multiple-output (MIMO) spatial multiplexing systems is investigated. Minimization of bit… 
1994
1994
The synthesis and conformation of 2′- and 3′-hypermodified tricyclic nucleosides and their use in the synthesis of novel 2′- or 3′-isomeric 4(7)-substituted isoxazolidine-nucleosides
1991
1991
Vector and parallel algorithms for the molecular dynamics simulation of macromolecules on shared‐memory computers
A detailed description of vector/parallel algorithms for the molecular dynamics (MD) simulation of macromolecular systems on… 
1991
1991
Mycetobiine woodgnats (Diptera, Anisopodidae) from the Oligo-Miocene amber of the Dominican Republic, and Old World affinities. American Museum novitates ; no. 3014
Four new species ofAnisopodidae are described from the upper Oligocene-lower Miocene amber of the Dominican Republic, Hispaniola… 
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