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Transcriptome

Known as: Transcriptomes 
The pattern of GENE EXPRESSION at the level of genetic transcription in a specific organism or under specific circumstances in specific cells.
National Institutes of Health

Papers overview

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Highly Cited
2015
Highly Cited
2015
Methods used to sequence the transcriptome often produce more than 200 million short sequences. We introduce StringTie, a… Expand
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Highly Cited
2012
Highly Cited
2012
TopHat is a popular spliced aligner for RNA-sequence (RNA-seq) experiments. In this paper, we describe TopHat2, which… Expand
Highly Cited
2011
Highly Cited
2011
Massively parallel sequencing of cDNA has enabled deep and efficient probing of transcriptomes. Current approaches for transcript… Expand
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Highly Cited
2011
Highly Cited
2011
Brain development and function depend on the precise regulation of gene expression. However, our understanding of the complexity… Expand
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Highly Cited
2010
Highly Cited
2010
RNA transcripts are subject to posttranscriptional gene regulation involving hundreds of RNA-binding proteins (RBPs) and microRNA… Expand
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Review
2009
Review
2009
RNA-Seq is a recently developed approach to transcriptome profiling that uses deep-sequencing technologies. Studies using this… Expand
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Highly Cited
2008
Highly Cited
2008
We have mapped and quantified mouse transcriptomes by deeply sequencing them and recording how frequently each gene is… Expand
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Highly Cited
2008
Highly Cited
2008
Through alternative processing of pre-messenger RNAs, individual mammalian genes often produce multiple mRNA and protein isoforms… Expand
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Review
2008
Review
2008
We carried out the first analysis of alternative splicing complexity in human tissues using mRNA-Seq data. New splice junctions… Expand
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Highly Cited
2004
Highly Cited
2004
The tissue-specific pattern of mRNA expression can indicate important clues about gene function. High-density oligonucleotide… Expand
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