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We present an update to our Galaxy-based web server for processing and visualizing deeply sequenced data. Its core tool set… Expand ENDscript 2 is a friendly Web server for extracting and rendering a comprehensive analysis of primary to quaternary protein… Expand HMMER is a software suite for protein sequence similarity searches using probabilistic methods. Previously, HMMER has mainly been… Expand Our web site (http://ekhidna.biocenter.helsinki.fi/dali_server) runs the Dali program for protein structure comparison. The web… Expand HHpred is a fast server for remote protein homology detection and structure prediction and is the first to implement pairwise… Expand The abbreviated name, 'mfold web server', describes a number of closely related software applications available on the World Wide… Expand SWISS-MODEL (http://swissmodel.expasy.org) is a server for automated comparative modeling of three-dimensional (3D) protein… Expand The newest version of MUMmer easily handles comparisons of large eukaryotic genomes at varying evolutionary distances, as… Expand The ExPASy (the Expert Protein Analysis System) World Wide Web server (http://www.expasy.org), is provided as a service to the… Expand The Vienna RNA secondary structure server provides a web interface to the most frequently used functions of the Vienna RNA… Expand