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Robinson–Foulds metric
Known as:
Robinson-Foulds metric
The Robinson–Foulds metric is a way to measure the distance between unrooted phylogenetic trees. It is defined as (A + B) where A is the number of…
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Computational phylogenetics
PHYLogeny Inference Package
Phylogenetics
Quantitative comparative linguistics
T-REX (webserver)
Papers overview
Semantic Scholar uses AI to extract papers important to this topic.
2019
2019
TRACTION: Fast Non-Parametric Improvement of Estimated Gene Trees
Sarah A. Christensen
,
Erin K. Molloy
,
P. Vachaspati
,
T. Warnow
Workshop on Algorithms in Bioinformatics
2019
Corpus ID: 201803728
Gene tree correction aims to improve the accuracy of a gene tree by using computational techniques along with a reference tree…
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2018
2018
Linear-Time Algorithms for Some Phylogenetic Tree Completion Problems Under Robinson-Foulds Distance
Mukul S. Bansal
RECOMB Comparative Genomics Satellite Conference
2018
Corpus ID: 51919617
We consider two fundamental computational problems that arise when comparing phylogenetic trees, rooted or unrooted, with non…
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2017
2017
Optimal Completion of Incomplete Gene Trees in Polynomial Time Using OCTAL
Sarah A. Christensen
,
Erin K. Molloy
,
P. Vachaspati
,
T. Warnow
Workshop on Algorithms in Bioinformatics
2017
Corpus ID: 6340240
Here we introduce the Optimal Tree Completion Problem, a general optimization problem that involves completing an unrooted binary…
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2013
2013
The Generalized Robinson-Foulds Metric
Sebastian Böcker
,
S. Canzar
,
G. Klau
Workshop on Algorithms in Bioinformatics
2013
Corpus ID: 14522744
The Robinson-Foulds (RF) metric is arguably the most widely used measure of phylogenetic tree similarity, despite its well-known…
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2013
2013
Inferring species trees from incongruent multi-copy gene trees using the Robinson-Foulds distance
R. Chaudhary
,
J. Burleigh
,
David Fernández-Baca
Algorithms for Molecular Biology
2013
Corpus ID: 255946115
Constructing species trees from multi-copy gene trees remains a challenging problem in phylogenetics. One difficulty is that the…
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2013
2013
Discriminative measures for comparison of phylogenetic trees
Ömür Arslan
,
Dan P. Guralnik
,
D. Koditschek
Discrete Applied Mathematics
2013
Corpus ID: 11656259
2012
2012
A Robinson-Foulds Measure to Compare Unrooted Trees with Rooted Trees
P. Górecki
,
O. Eulenstein
International Symposium on Bioinformatics…
2012
Corpus ID: 37318428
The Robinson-Foulds (RF) distance is a well-established measure for the comparative analysis of phylogenetic trees, and comparing…
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2008
2008
Fast Hashing Algorithms to Summarize Large Collections of Evolutionary Trees
Seung-Jin Sul
,
T. Williams
2008
Corpus ID: 6264583
Different phylogenetic methods often yield different inferred trees for the same set of organisms. Moreover, a single…
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2006
2006
smoking in Sweden Role of snus in initiation and cessation of tobacco
L. Ramström
,
J. Foulds
2006
Corpus ID: 8932353
2006
2006
A Sublinear-Time Randomized Approximation Scheme for the Robinson-Foulds Metric
N. Pattengale
,
Bernard M. E. Moret
Annual International Conference on Research in…
2006
Corpus ID: 760728
The Robinson-Foulds (RF) metric is the measure most widely used in comparing phylogenetic trees; it can be computed in linear…
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