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Repressilator

The repressilator is a synthetic genetic regulatory network consisting of a ring-oscillator with three genes, each expressing a protein that… 
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BioModels DatabaseFeedbackSynthetic biology

Papers overview

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2019
2019
Persistence of Excitation for Koopman Operator Represented Dynamical Systems
The increase in complexity of engineered systems and naturally occurring systems, coupled with increasingly data-driven… 
2018
2018
Frontiers of Mat,ematical Biology Modeling, Computation and Analysis
  • 2018
  • Corpus ID: 13847194
s of Plenary Talks May 2, 14:00-15:00, Room 201 Gradient dynamics: motion near a manifold of quasi-equilibria Peter Bates… 
2015
2015
Synchrony between Genetic Repressilators in Sister Cells in Different Temperatures
Authors : Jerome G. Chandraseelan, Samuel M. D. Oliveira, Antti Hakkinen, Sofia Startceva, Andre S. Ribeiro Abstract : We used… 
2015
2015
High-Performance Discrete Bifurcation Analysis for Piecewise-Affine Dynamical Systems
Analysis of equilibria, their stability and instability, is an unavoidable ingredient of model analysis in systems biology. In… 
2014
2014
Bayesian Approaches to Nonlinear Network Reconstruction
This technical note considers the reconstruction of discrete-time nonlinear systems with additive noise. In particular, we… 
2014
2014
Shaping Pulses to Control Multi-Stable Biological Systems
In this paper, we present a framework for shaping pulses to control biological systems. By shaping a pulse we mean computing its… 
2012
2012
Electronic Repressilator with Quorum Sensing Feedback
We investigate the dynamics of an electronic ring oscillator, analog of synthetic genetic repressilator (e-Rep), with quorum… 
2011
2011
Intracellular network attractor selection and the problem of cell fate decision
This project aims at understanding how cell fate decision emerges from the overall intracellular network connectivity and… 
2011
2011
Control of the dynamical behavior of the Repressilator by Quorum Sensing
With advance achieved in gene engineering it has become possible to construct genetic circuits with programmed behavior. Genetic… 
2007
2007
Noise characteristics of interlocked repressilators
Oscillators are important components of biological systems. Biochemical networks that exhibit oscillatory behavior are used at… 
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