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Representative sequences

Protein sequences can provide data about the biological function and evolution of proteins and protein domains. Grouping and interrelating protein… (More)
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Topic mentions per year

Topic mentions per year

1993-2016
024619932016

Related topics

Related topics

3 relations

Broader (1)

Bioinformatics
FunctionSequence clustering

Related mentions per year

Related mentions per year

1957-2018
1960198020002020
Representative sequences
Bioinformatics
Function
Sequence clustering

Papers overview

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Highly Cited
2013
Highly Cited
2013
The Protist Ribosomal Reference database (PR2): a catalog of unicellular eukaryote Small Sub-Unit rRNA sequences with curated taxonomy
The interrogation of genetic markers in environmental meta-barcoding studies is currently seriously hindered by the lack of… (More)
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2012
2012
The Protist Ribosomal Reference database (PR): a catalog of unicellular eukaryote Small Sub-Unit rRNA sequences with curated taxonomy
The interrogation of genetic markers in environmental meta-barcoding studies is currently seriously hindered by the lack of… (More)
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2010
2010
Extracting and Rendering Representative Sequences
Abstract. This paper is concerned with the summarization of a set of categorical sequences. More specifically, the problem… (More)
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2010
2010
A grammar-based distance metric enables fast and accurate clustering of large sets of 16S sequences
We propose a sequence clustering algorithm and compare the partition quality and execution time of the proposed algorithm with… (More)
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2009
2009
Summarizing Sets of Categorical Sequences - Selecting and Visualizing Representative Sequences
This paper is concerned with the summarization of a set of categorical sequence data. More specifically, the problem studied is… (More)
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2007
2007
Random Ergodic Theorems with Universally Representative
When elements of a measure-preserving action of R d or Z d are selected in a random way, according to a stationary stochastic… (More)
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Highly Cited
2001
Highly Cited
2001
Clustering of highly homologous sequences to reduce the size of large protein databases
We present a fast and flexible program for clustering large protein databases at different sequence identity levels. It takes… (More)
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2000
2000
Video Summarization Using R-Sequences
I n this paper, we propose a new method of temporal summarization of digital video. First, we address the problem of extracting a… (More)
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2000
2000
Saturated BLAST: an automated multiple intermediate sequence search used to detect distant homology
MOTIVATION Two proteins can have a similar 3-dimensional structure and biological function, but have sequences sufficiently… (More)
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Highly Cited
1998
Highly Cited
1998
Removing near-neighbour redundancy from large protein sequence collections
MOTIVATION To maximize the chances of biological discovery, homology searching must use an up-to-date collection of sequences… (More)
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