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PIQED: automated identification and quantification of protein modifications from DIA-MS data
PeptideProphet is a post-processing algorithm designed to evaluate the confidence in identifications of MS/MS spectra returned by… Expand The combination of tandem mass spectrometry and sequence database searching is the method of choice for the identification of… Expand The challenge of estimating false discovery rates (FDR) in peptide identification from MS/MS spectra has received increased… Expand Development of statistical methods for assessing the significance of peptide assignments to tandem mass spectra obtained using… Expand Development of robust statistical methods for validation of peptide assignments to tandem mass (MS/MS) spectra obtained using… Expand Tandem mass spectrometry (MS/MS) is frequently used in the identification of peptides and proteins. Typical proteomic experiments… Expand The shotgun proteomics strategy, based on digesting proteins into peptides and sequencing them using tandem mass spectrometry (MS… Expand MOTIVATION
Tandem mass spectrometry (MS/MS) identifies protein sequences using database search engines, at the core of which is a… Expand MS/MS and associated database search algorithms are essential proteomic tools for identifying peptides. Due to their widespread… Expand