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Mathematical Markup Language
Known as:
MzXML
An application of XML for describing mathematical notations and capturing both its structure and content. It aims at integrating mathematical…
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National Institutes of Health
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Extensible Markup Language
Papers overview
Semantic Scholar uses AI to extract papers important to this topic.
Highly Cited
2015
Highly Cited
2015
PRIDE Inspector Toolsuite: Moving Toward a Universal Visualization Tool for Proteomics Data Standard Formats and Quality Assessment of ProteomeXchange Datasets
Yasset Pérez-Riverol
,
Qing-Wei Xu
,
+11 authors
J. Vizcaíno
Molecular & Cellular Proteomics
2015
Corpus ID: 3135405
The original PRIDE Inspector tool was developed as an open source standalone tool to enable the visualization and validation of…
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Review
2015
Review
2015
CycloBranch: De Novo Sequencing of Nonribosomal Peptides from Accurate Product Ion Mass Spectra
J. Novák
,
K. Lemr
,
K. Schug
,
V. Havlíček
Journal of the American Society for Mass…
2015
Corpus ID: 207470364
AbstractNonribosomal peptides have a wide range of biological and medical applications. Their identification by tandem mass…
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Review
2015
Review
2015
QCScreen: a software tool for data quality control in LC-HRMS based metabolomics
Alexandra Simader
,
Bernhard Kluger
,
+5 authors
R. Schuhmacher
BMC Bioinformatics
2015
Corpus ID: 12582017
Metabolomics experiments often comprise large numbers of biological samples resulting in huge amounts of data. This data needs to…
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2012
2012
LFQuant: A label‐free fast quantitative analysis tool for high‐resolution LC‐MS/MS proteomics data
Wei Zhang
,
Jiyang Zhang
,
+5 authors
Hongwei Xie
Proteomics
2012
Corpus ID: 29512787
Database searching based methods for label‐free quantification aim to reconstruct the peptide extracted ion chromatogram based on…
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Highly Cited
2012
Highly Cited
2012
Math Jax: a platform for mathematics on the web
D. Cervone
2012
Corpus ID: 18428828
Over the past three years, a project has been quietly evolving that has important implications for those interested in using…
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2011
2011
mz5: Space- and Time-efficient Storage of Mass Spectrometry Data Sets*
Mathias Wilhelm
,
Marc Kirchner
,
J. Steen
,
H. Steen
Molecular & Cellular Proteomics
2011
Corpus ID: 8190053
Across a host of MS-driven-omics fields, researchers witness the acquisition of ever increasing amounts of high throughput MS…
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Highly Cited
2009
Highly Cited
2009
Comparison of MS(2)-only, MSA, and MS(2)/MS(3) methodologies for phosphopeptide identification.
P. Ulintz
,
Anastasia K. Yocum
,
B. Bodenmiller
,
R. Aebersold
,
P. Andrews
,
A. Nesvizhskii
Journal of Proteome Research
2009
Corpus ID: 35061784
Current mass spectrometers provide a number of alternative methodologies for producing tandem mass spectra specifically for…
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2009
2009
Combining alkaline phosphatase treatment and hybrid linear ion trap/Orbitrap high mass accuracy liquid chromatography-mass spectrometry data for the efficient and confident identification of protein…
Hsin‐Yi Wu
,
V. Tseng
,
+6 authors
P. Liao
Analytical Chemistry
2009
Corpus ID: 6321440
Protein phosphorylation is a vital post-translational modification that is involved in a variety of biological processes. Several…
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Highly Cited
2007
Highly Cited
2007
Five years of progress in the Standardization of Proteomics Data 4th Annual Spring Workshop of the HUPO‐Proteomics Standards Initiative April 23–25, 2007 Ecole Nationale Supérieure (ENS), Lyon…
S. Orchard
,
Luisa Montechi‐Palazzi
,
+7 authors
H. Hermjakob
Proteomics
2007
Corpus ID: 22837325
Over the last five years, the Human Proteome Organisation Proteomics Standards Initiative (HUPO PSI) has produced and released…
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2003
2003
CytometryML, an XML format based on DICOM and FCS for analytical cytology data
R. Leif
,
S. B. Leif
,
S. H. Leif
Cytometry Part A
2003
Corpus ID: 24725870
Flow Cytometry Standard (FCS) was initially created to standardize the software researchers use to analyze, transmit, and store…
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