MUSCLE (alignment software)

Known as: Multiple Sequence Comparison by Log-Expectation, Muscle (disambiguation), Robert C. Edgar 
MUSCLE (multiple sequence comparison by log-expectation) is public domain, multiple sequence alignment software for protein and nucleotide sequences… (More)
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AMAPBMC BioinformaticsBinary treeClustalW/ClustalX
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Computational phylogenetics

Papers overview

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Highly Cited
2011
Highly Cited
2011
Aligning short reads to reference alignments and trees
MOTIVATION Likelihood-based methods for placing short read sequences from metagenomic samples into reference phylogenies have… (More)
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Highly Cited
2006
Highly Cited
2006
Probalign: multiple sequence alignment using partition function posterior probabilities
MOTIVATION The maximum expected accuracy optimization criterion for multiple sequence alignment uses pairwise posterior… (More)
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2006
2006
Parallel implementation and performance characterization of MUSCLE
Multiple sequence alignment is a fundamental and very computationally intensive task in molecular biology. MUSCLE, a new… (More)
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Highly Cited
2004
Highly Cited
2004
MUSCLE: a multiple sequence alignment method with reduced time and space complexity
In a previous paper, we introduced MUSCLE, a new program for creating multiple alignments of protein sequences, giving a brief… (More)
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Highly Cited
2004
Highly Cited
2004
MUSCLE: multiple sequence alignment with improved accuracy and speed
We present MUSCLE, a new program for creating multiple alignments of protein sequences. MUSCLE achieves the highest scores so far… (More)
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Highly Cited
2003
Highly Cited
2003
Ca2+-Dependent Activation of Rho and Rho Kinase in Membrane Depolarization–Induced and Receptor Stimulation–Induced Vascular Smooth Muscle Contraction
 
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1980
1980
TEXTURE OF FISH MUSCLE
 
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1976
1976
MUSCLE FIBRE SPLITTING AND REGENERATION IN DISEASED HUMAN MUSCLE
 
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Highly Cited
1966
Highly Cited
1966
Types of Muscle Fibres in Toad Skeletal Muscle
 
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Highly Cited
1933
Highly Cited
1933
TENDON AND MUSCLE RUPTURES
 
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