List of biological databases

Known as: Bioinformatics Databases, List of bioinformatics databases, Protein sequence databases 
Biological databases are stores of biological information.
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Barcode of Life Data SystemsBioGRIDBioinformatics Resource CentersBiological database
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Bioinformatics

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Highly Cited
2012
Highly Cited
2012
The NCBI Taxonomy database
The NCBI Taxonomy database (http://www.ncbi.nlm.nih.gov/taxonomy) is the standard nomenclature and classification repository for… (More)
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2010
2010
Low-homology protein threading
MOTIVATION The challenge of template-based modeling lies in the recognition of correct templates and generation of accurate… (More)
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Highly Cited
2009
Highly Cited
2009
Annotation Error in Public Databases: Misannotation of Molecular Function in Enzyme Superfamilies
Due to the rapid release of new data from genome sequencing projects, the majority of protein sequences in public databases have… (More)
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Highly Cited
2007
Highly Cited
2007
DAVID Bioinformatics Resources: expanded annotation database and novel algorithms to better extract biology from large gene lists
All tools in the DAVID Bioinformatics Resources aim to provide functional interpretation of large lists of genes derived from… (More)
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Highly Cited
2007
Highly Cited
2007
DAVID Knowledgebase: a gene-centered database integrating heterogeneous gene annotation resources to facilitate high-throughput gene functional analysis
Due to the complex and distributed nature of biological research, our current biological knowledge is spread over many redundant… (More)
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Highly Cited
2005
Highly Cited
2005
The Universal Protein Resource (UniProt)
The Universal Protein Resource (UniProt) provides the scientific community with a single, centralized, authoritative resource for… (More)
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Highly Cited
2005
Highly Cited
2005
Protein sequence classification using extreme learning machine
Traditionally, two protein sequences are classified into the same class if they have high homology in terms of feature patterns… (More)
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Highly Cited
2004
Highly Cited
2004
OGSA-DQP: A Service for Distributed Querying on the Grid
OGSA-DQP is a distributed query processor exposed to users as an Open Grid Services Architecture (OGSA)-compliant Grid service… (More)
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2001
2001
GlycoSuiteDB: a new curated relational database of glycoprotein glycan structures and their biological sources
GlycoSuiteDB is a relational database that curates information from the scientific literature on glyco-protein derived glycan… (More)
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Highly Cited
1999
Highly Cited
1999
Cluster-preserving embedding of proteins
Similarity searching in protein sequence databases is a standard technique for biologists dealing with a newly sequenced protein… (More)
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