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GeneMark
GeneMark is a generic name for a family of ab initio gene prediction programs developed at the Georgia Institute of Technology in Atlanta. Developed…
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Bioinformatics
GLIMMER
Gene prediction
Hidden Markov model
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Papers overview
Semantic Scholar uses AI to extract papers important to this topic.
2018
2018
Complete genome sequence of a phage hyperparasite of Candidatus
2018
Corpus ID: 261702537
Bacteriophages are recognized as major mortality agents of microbes, among them intracellular marine rickettsiales-like bacteria…
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2017
2017
Bayesian Classification of Ribosome Binding Sites in Prokaryotic Genome Sequences: A Communications Theory Approach
M. A. Al Bataineh
,
Z. Al-qudah
2017
Corpus ID: 54832597
Dramatic advances in genomics and computational biology have resulted in large amounts of data and have encouraged the…
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2015
2015
Draft Genome Sequence of Bacillus tequilensis Strain FJAT-14262 a
Qian-Qian Chen
2015
Corpus ID: 34899245
The genus Bacillus is the most diverse and prominent genus of aerobic endospore-forming bacteria (1), consisting of ~299 species…
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2014
2014
Finding small genes by conservation with a focus on bacteriocins
K. E. Grashei
2014
Corpus ID: 88586964
Gene prediction software is often used to predict genes in genomes through automated annotation pipelines. The success of popular…
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2010
2010
Scalable, updatable predictive models for sequence data
Neeraj Koul
,
N. Bui
,
Vasant G Honavar
IEEE International Conference on Bioinformatics…
2010
Corpus ID: 6810480
The emergence of data rich domains has led to an exponential growth in the size and number of data repositories, offering…
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2008
2008
Enhancing Microbial Genome Finishing Through Frameshift Targeting
Brian Foster
,
E. Goltsman
,
K. Labutti
,
Steve Lowry
,
A. Lapidus
2008
Corpus ID: 64867784
Author(s): Foster, Brian; Goltsman, Eugene; LaButti, Kurt; Lowry, Steve; Lapidus, Alla L. | Abstract: The JGI?s finishing…
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2008
2008
The 4M (Mixed Memory Markov Model) Algorithm for Finding Genes in Prokaryotic Genomes
M. Vidyasagar
,
S. Mande
,
Ch. V. Siva K. Reddy
,
V. V. Raja Rao
IEEE Transactions on Automatic Control
2008
Corpus ID: 36996554
In this paper, we present a new algorithm called 4M (mixed memory Markov model) for finding genes from the genomes of prokaryotes…
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2007
2007
TRANSCRIPTION PATTERN COMPARISON OF TWO UBIQUITIN SPECIFIC PROTEASES (USP6 AND USP32 ) A THESIS SUBMITTED TO THE GRADUATE SCHOOL OF NATURAL AND APPLIED SCIENCE OF MIDDLE EAST TECHNICAL UNIVERSITY
Shiva Akhavan Tabasi
2007
Corpus ID: 74487138
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2007
2007
Improving accuracy of gene prediction programs of the genemark family by means of genome segmentation
M. Borodovsky
2007
Corpus ID: 88606235
Motivation: Genomic sequences are highly redundant and contain many types of repetitive DNA. Fuzzy tandem repeats (FTRs) are of…
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1997
1997
Prediction Rate of Coding Regions is Enhanced upto 99.15% by Joint Use of GeneMark-RC and GeneHacker in Case of a Cyanobacterium
M. Hirosawa
1997
Corpus ID: 15278941
The advancement in large-scale sequencing has accelerated the production of long contiguous nucleotide sequence data. The whole…
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