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FM-index
Known as:
Feragina-Manzini index
, Ferragina-Manzini index
, Fm index
In computer science, an FM-index is a compressed full-text substring index based on the Burrows-Wheeler transform, with some similarities to the…
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Related topics
Related topics
11 relations
Bioinformatics
Bowtie (sequence analysis)
Burrows–Wheeler transform
Compressed data structure
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Papers overview
Semantic Scholar uses AI to extract papers important to this topic.
2018
2018
Digital Predistorter with Real-Valued Feedback Employing Forward Model Estimation
Jan Král
,
T. Gotthans
,
R. Maršálek
,
Michal Harvanek
International Conference on Telecommunications
2018
Corpus ID: 52290427
Digital predistorters (DPD) are used in modern communication systems to linearise nonlinear power amplifiers (PA) and maximise…
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2018
2018
UdeAlignC: Fast Alignment for the Compression of DNA Reads
Jaime Lotero
,
Andrés Benavides
,
Aníbal Guerra
,
S. Isaza
IEEE Colombian Conference on Communications and…
2018
Corpus ID: 52301054
Referential compression algorithms are one of the main strategies to cope with the exponential growth of DNA data available to…
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2016
2016
Rank and select: Another lesson learned
S. Grabowski
,
Marcin Raniszewski
Information Systems
2016
Corpus ID: 126748
Review
2015
Review
2015
Repeat Finding Techniques, Data Structures and Algorithms in DNA sequences: A Survey
Freeson Kaniwa
,
H. Schroeder
,
Otlhapile Dinakenyane
2015
Corpus ID: 10569263
DNA sequencing technologies keep getting faster and cheaper leading to massive availability of entire human genomes. This massive…
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2015
2015
Equilibration of hadrons in HICs via Hagedorn States
M. Beitel
,
K. Gallmeister
,
C. Greiner
2015
Corpus ID: 118511024
Hagedorn states (HS) are a tool to model the hadronization process which occurs in the phase transition region between the quark…
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2014
2014
Strategic Pattern Search in Factor-Compressed Text
Simon Gog
,
Alistair Moffat
,
M. Petri
SPIRE
2014
Corpus ID: 32450573
We consider the problem of pattern-search in compressed text in a context in which: (a) the text is stored as a sequence of…
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2008
2008
Dynamic Burrows-Wheeler Transform
Mikaël Salson
,
T. Lecroq
,
Martine Léonard
,
L. Mouchard
Prague Stringology Conference
2008
Corpus ID: 11218595
The Burrows-Wheeler Transform is a building block for many text com- pression applications and self-index data structures. It…
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2008
2008
Parallelization of FM-Index
Di Zhang
,
Yunquan Zhang
,
Shengfei Liu
,
Xiaodi Huang
IEEE International Conference on High Performance…
2008
Corpus ID: 9623048
A parallel design and implementation of FM-index is presented in this paper. In applications, the performance of the FM-index is…
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2003
2003
Ferromagnetic insulating phase in Pr{1-x}Ca{x}MnO3
R. Kajimoto
,
H. Mochizuki
,
H. Yoshizawa
,
S. Okamoto
,
S. Ishihara
2003
Corpus ID: 117783345
1997
1997
Knowledge Discovering for Document Classification Using Tree Matching in TEXPROS
C. Wei
,
Qianhong Liu
,
J. Wang
,
P. Ng
Information Sciences
1997
Corpus ID: 19549025
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