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De novo transcriptome assembly

Known as: De novo 
De novo transcriptome assembly is the method of creating a transcriptome without the aid of a reference genome.
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Related topics

Related topics

16 relations
BLASTBlast2GODe Bruijn graphHybrid genome assembly

Broader (4)

BioinformaticsComputational biologyOmicsSystems biology

Papers overview

Semantic Scholar uses AI to extract papers important to this topic.
2015
2015
CEO Assessment and the Structure of Newly Formed Boards
Following corporate spinoffs, unit boards are formed from scratch. We find that these "de novo" boards are smaller, more… 
Highly Cited
2011
Highly Cited
2011
The role of impaired de novo Coenzyme A biosynthesis in pantothenate kinase-associated neurodegeneration
Coenzyme A (CoA) is an essential cofactor required for cellular metabolism. CoA is synthesized de novo from pantothenate (vitamin… 
2011
2011
SPATA: A seeding and patching algorithm for de novo transcriptome assembly
RNA-seq reads are sampled from the underlying human transcriptome sequence, consisting of hundreds of thousands of mRNA… 
2011
2011
De novo sequencing and assembly of Azadirachta indica fruit transcriptome
Neem is a unique, versatile and im-portant tree species, used for multi-ple purposes, and often called as the panacea of all… 
Highly Cited
2006
Highly Cited
2006
Characterization of the MIPS gene family in Glycine max
Phytic acid (myo-inositol-1,2,3,4,5,6-hexakisphosphate) is the primary storage component of phosphorus in plant seeds. The first… 
Highly Cited
2004
Highly Cited
2004
Arabidopsis CYP 707 A s Encode ( 1 )-Abscisic Acid 8 9-Hydroxylase , a Key Enzyme in the Oxidative Catabolism of Abscisic Acid 1
  • 2004
  • Corpus ID: 30010024
Abscisic acid (ABA) is involved in a number of critical processes in normal growth and development as well as in adaptive… 
Highly Cited
2003
Highly Cited
2003
Molecular phylogeny of the endemic Philippine rodent Apomys (Muridae) and the dynamics of diversification in an oceanic archipelago
We analysed the phylogenetic relationships of ten of the 13 known species of the genus Apomys using DNA sequences from cytochrome… 
Highly Cited
1996
Highly Cited
1996
In vitro regeneration of chickpea (Cicer arietinum L.): Stimulation of direct organogenesis and somatic embryogenesis by thidiazuron
In vitro regeneration in chickpea (Cicer arietinum L.) was achieved by direct culture of mature seeds on Murashige and Skoog (MS… 
1987
1987
De novo synthesis of carbohydrates and related natural products
Abstract 
Highly Cited
1962
Highly Cited
1962
Purification and Properties of Liver Glutamic-Alanine Transaminase from Normal and Corticoid-treated Rats
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