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Critical Assessment of Function Annotation

The Critical Assessment of Functional Annotation (CAFA) is an experiment designed to provide a large-scale assessment of computational methods… (More)
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Topic mentions per year

2011-2017
024620112017

Related topics

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7 relations
BLASTCASPGene ontologyHuman Phenotype Ontology
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Broader (1)

Bioinformatics

Related mentions per year

Related mentions per year

1964-2018
1960198020002020
Critical Assessment of Function Annotation
Bioinformatics
BLAST
Gene ontology
Protein function prediction
CASP

Papers overview

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2017
2017
Protein Function Prediction
Elucidating biological function of proteins is a fundamental problem in molecular biology and bioinformatics. Conventionally… (More)
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2016
2016
Extensive complementarity between gene function prediction methods
MOTIVATION The number of sequenced genomes rises steadily but we still lack the knowledge about the biological roles of many… (More)
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2015
2015
Ten Simple Rules for a Community Computational Challenge
1 Department of Microbiology, Miami University, Oxford, Ohio, United States of America, 2 Department of Computer Science and… (More)
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2013
2013
Characterizing the state of the art in the computational assignment of gene function: lessons from the first critical assessment of functional annotation (CAFA)
The assignment of gene function remains a difficult but important task in computational biology. The establishment of the first… (More)
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2013
2013
Three-Level Prediction of Protein Function by Combining Profile-Sequence Search, Profile-Profile Search, and Domain Co-Occurrence Networks
Predicting protein function from sequence is useful for biochemical experiment design, mutagenesis analysis, protein engineering… (More)
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2013
2013
MS-kNN: protein function prediction by integrating multiple data sources
Protein function determination is a key challenge in the post-genomic era. Experimental determination of protein functions is… (More)
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2013
2013
In-depth performance evaluation of PFP and ESG sequence-based function prediction methods in CAFA 2011 experiment
Many Automatic Function Prediction (AFP) methods were developed to cope with an increasing growth of the number of gene sequences… (More)
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Review
2013
Review
2013
A (not so) Quick Introduction to Protein Function Prediction
This document is primarily intended for computer scientists as a rapid introduction to the area of protein function prediction. I… (More)
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2013
2013
A domain-centric solution to functional genomics via dcGO Predictor
Computational/manual annotations of protein functions are one of the first routes to making sense of a newly sequenced genome… (More)
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2011
2011
Gene Ontology consistent protein function prediction: the FALCON algorithm applied to six eukaryotic genomes
Gene Ontology (GO) is a hierarchical vocabulary for the description of biological functions and locations, often employed by… (More)
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