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ChIP-On-Chip

Known as: ChIP-Chip, Chromatin Immunoprecipitation-On-Chip 
A molecular genetic technique that combines chromatin immunoprecipitation (ChIP) with DNA microarray technology to find candidate binding sites of… 
National Institutes of Health

Papers overview

Semantic Scholar uses AI to extract papers important to this topic.
2016
2016
The Role of Genome Accessibility in Transcription Factor Binding in Bacteria
ChIP-seq enables genome-scale identification of regulatory regions that govern gene expression. However, the biological insights… 
2015
2015
Genome-Wide Characterization of cis-Acting DNA Targets Reveals the Transcriptional Regulatory Framework of Opaque 2 in Maize
Chaobin Li,a,1 Zhenyi Qiao,a,1 Weiwei Qi,a,b,1 Qian Wang,a Yue Yuan,a Xi Yang,a Yuanping Tang,a Bing Mei,a Yuanda Lv,c Han Zhao,c… 
2014
2014
PolyaPeak: Detecting Transcription Factor Binding Sites from ChIP-seq Using Peak Shape Information
ChIP-seq is a powerful technology for detecting genomic regions where a protein of interest interacts with DNA. ChIP-seq data for… 
2014
2014
Metastasis-Associated Protein Ribosomal RNA Processing 1 Homolog B (RRP1B) Modulates Metastasis through Regulation of Histone Methylation
Overexpression of ribosomal RNA processing 1 homolog B (RRP1B) induces a transcriptional profile that accurately predicts patient… 
2013
2013
dPeak: High Resolution Identification of Transcription Factor Binding Sites from PET and SET ChIP-Seq Data
Chromatin immunoprecipitation followed by high throughput sequencing (ChIP-Seq) has been successfully used for genome-wide… 
2012
2012
Genome-wide in vivo cross-linking of sequence-specific transcription factors.
Immunoprecipitation of cross-linked chromatin in combination with microarrays (ChIP-chip) or ultra high-throughput sequencing… 
2011
2011
Optimized detection of transcription factor-binding sites in ChIP-seq experiments
We developed a computational procedure for optimizing the binding site detections in a given ChIP-seq experiment by maximizing… 
2010
2010
ChIP-PaM: an algorithm to identify protein-DNA interaction using ChIP-Seq data
BackgroundChIP-Seq is a powerful tool for identifying the interaction between genomic regulators and their bound DNAs, especially… 
2008
2008
Integrating quantitative information from ChIP-chip experiments into motif finding.
Identifying binding locations of transcription factors (TFs) within long segments of noncoding DNA is a challenging task. Recent… 
2007
2007
Effects of Replacing Ground Corn with Cassava Chip in Concentrate on Feed Intake, Nutrient Utilization, Rumen Fermentation Characteristics and Microbial Populations in Goats
Ten male crossbred (Thai Nubian) goats with average live weight of kg were randomly assigned according to a replicated Latin… 
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