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ChEBI

Known as: Chemical Entities of Biological Interest 
Chemical Entities of Biological Interest, also known as ChEBI, is a database and ontology of molecular entities focused on 'small' chemical compounds… 
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Papers overview

Semantic Scholar uses AI to extract papers important to this topic.
2020
2020
Mining drug-drug interactions for healthcare professionals
The fourth leading cause of death in the US are Adverse Drug Reactions (ADRs)1 that can be brought about through Drug-Drug… 
2019
2019
Ontology-based transporter substrate annotation for benchmark datasets
Construction of benchmark datasets for supervised learning requires a label or class to be assigned to each datapoint. This is… 
Review
2016
Review
2016
Towards standardized evidence descriptors for metabolite annotations
Motivation: Data on measured abundances of small molecules from biomaterial is currently accumulating in the literature and in… 
2016
2016
A Quality-Assurance Study of ChEBI
Ontologies are important components of many health-information systems. The Chemical Entities of Biological Interest (ChEBI… 
2012
2012
Wanting what we don't want to want: Representing addiction in interoperable bio-ontologies
Ontologies are being developed throughout the biomedical sciences to address standardization, integration, classification and… 
2011
2011
Parts and Wholes, Shapes and Holes in Living Beings
All living beings are constituted by molecular entities continuously interacting with each other in the complex patterns through… 
2011
2011
A Model for Collaborative Curation, The IEDB and ChEBI Curation of Non-peptidic Epitopes
The Immune Epitope Database (IEDB) recently expanded and enhanced its non-peptidic epitope related data utilizing a collaboration… 
2010
2010
Chemical and Metabolic Pathway Semantic Similarity
Background: Similarity measures for the comparison of metabolic pathways can provide a better understanding of evolutionary… 
2009
2009
ChemAxiom – An Ontological Framework for Chemistry in Science
We present ChemAxiom as the first ontological framework for chemistry in science. ChemAxiom enables discourse about chemical… 
2008
2008
The ChEBI Ontology: An Ontology for Chemistry within a Biological Context
Chemical Entities of Biological Interest (ChEBI) is a freely available database of molecular entities and chemical concepts… 
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