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BioUML
BioUML is an open-source software platform for the analysis of data from omics sciences research and other advanced computational biology developed…
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Computational biology
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Semantic Scholar uses AI to extract papers important to this topic.
2015
2015
Patient-specific 1D model of the human cardiovascular system
I. Kiselev
,
F. Kolpakov
,
+5 authors
S. Krivoschekov
International Conference on Biomedical…
2015
Corpus ID: 17433209
A technique of parameter personalization of a 1d hemodynamic model is discussed and validated against physiological data of 1546…
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2015
2015
RULE-BASED MODELING IN BIOUML
N. Mandrik
,
E. Kutumova
,
F. Kolpakov
2015
Corpus ID: 195984797
Motivation and Aim : The traditional approach to mathematical modeling of biological systems involves usage of nonlinear systems…
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2015
2015
Interact with BioUML Server
I. Yevshin
,
T. Valeev
2015
Corpus ID: 177951640
2014
2014
BioUML: plugin for population-based modeling
I. Kiselev
,
F. Kolpakov
2014
Corpus ID: 62751561
Motivation and Aim: Non-linear mixed effects (NLME) model is an efficient tool for analyzing of population data and estimating of…
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2014
2014
RiboSeqDB – a repository of selected human and mouse ribosome footprint and RNA-seq data
R. Sharipov
,
I. Yevshin
,
Yury V. Kondrakhin
,
O. A. Volkova
2014
Corpus ID: 108834206
Motivation : At present time, there are many different data sets obtained as the results of ribosome profiling and RNA-seq…
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2013
2013
BioUML Genome Browser
T. Valeev
,
I. Yevshin
,
F. Kolpakov
2013
Corpus ID: 62697363
Motivation : The BioUML platform contains a number of analysis tools to process genomic data. The visualization of such data can…
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2013
2013
BioUML plug-in for nonlinear parameter estimation using multiple experimental data
E. Kutumova
,
A. Ryabova
,
T. Valeev
,
F. Kolpakov
2013
Corpus ID: 60522016
Motivation: Systems biology deals with many different types of experimental data representing individual components of biological…
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2006
2006
BioUML: VISUAL MODELING, AUTOMATED CODE GENERATION AND SIMULATION OF BIOLOGICAL SYSTEMS
F. Kolpakov
,
M. Puzanov
,
A. Koshukov
,
Sb Ras
2006
Corpus ID: 55646134
*SUMMARY Motivation: Reconstruction of complex biological systems from a huge amount of experimental data requires a formal…
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2006
2006
Chapter 6 – Standards, Platforms, and Applications
H. Sauro
2006
Corpus ID: 57452543
2003
2003
BIOUML - OPEN SOURCE EXTENSIBLE WORKBENCH FOR SYSTEMS BIOLOGY
F. Kolpakov
,
Sb Ras
2003
Corpus ID: 1180333
Summary Motivation: With the completion of several genomics initiatives, including the Human Genome Project, researchers are…
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