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Shotgun Sequencing

Unordered sequencing. Unmapped clones spanning a region of interest are sequenced and then assembled into a continuous sequence.
National Institutes of Health

Papers overview

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2017
2017
Fruit genomics: New apple genome
High-quality reference genomes not only facilitate our biological understanding of a species, but also pave the way for breeding… 
2014
2014
Molecular aspects of Moraxella catarrhalis pathogenesis : functional and comparative genomic studies
2013
2013
Title Optimal Assembly for High Throughput Shotgun Sequencing
We present a framework for the design of optimal assembly algorithms for shotgun sequencing under the criterion of complete… 
2012
2012
Genome shotgun sequencing and development of microsatellite markers for gerbera ( Gerbera hybrida H.) by 454 GS-FLX
The objective of this research was to develop and characterize microsatellite markers for gerbera. We used shotgun sequencing… 
2011
2011
One genome, two haplotypes
Two approaches using either fosmid clones or a microfluidic device are used to tackle the challenge of a haplotype-resolved human… 
Review
2010
Review
2010
Comparison of Short Read De Novo Alignment Algorithms
The objective of this paper is to survey the algorithms used for de novo alignment of short read data. Since the quality of the… 
2008
2008
Sequencing Whole Genomes Hierarchical Shotgun Sequencing v . Shotgun Sequencing
There are two general strategies for sequencing a complete genome. The method preferred by the Human Genome Project is the… 
2005
2005
Function estimated from the shotgun sequencing data
Using the map obtained from the shotgun library, by determining the existence of a gap in clone start sites on either side of the… 
2002
2002
Predicting Progress in Shotgun Sequencing with Paired Ends
Paired-end shotgun sequencing has become widely used for large-scale sequencing projects in recent years, including whole genome… 
2001
2001
National Science Foundation-Sponsored Workshop Report. Maize Genome Sequencing Project 1
In response to a mandate from the maize ( Zea mays ) genetics community, a National Science Foundation-sponsored workshop was…