Skip to search form
Skip to main content
Skip to account menu
Semantic Scholar
Semantic Scholar's Logo
Search 205,617,379 papers from all fields of science
Search
Sign In
Create Free Account
Phylogenetic Analysis
Known as:
Phylogenetics
Phylogenetic analysis is the study of evolutionary relationships among the many different kinds of life on earth, both living (extant) and dead…
Expand
National Institutes of Health
Create Alert
Alert
Papers overview
Semantic Scholar uses AI to extract papers important to this topic.
Highly Cited
2018
Highly Cited
2018
Posterior Summarization in Bayesian Phylogenetics Using Tracer 1.7
A. Rambaut
,
A. Drummond
,
Dong Xie
,
G. Baele
,
M. Suchard
Systematic biology
2018
Corpus ID: 21388879
Abstract Bayesian inference of phylogeny using Markov chain Monte Carlo (MCMC) plays a central role in understanding evolutionary…
Expand
Highly Cited
2017
Highly Cited
2017
ModelFinder: Fast Model Selection for Accurate Phylogenetic Estimates
S. Kalyaanamoorthy
,
B. Minh
,
Thomas K. F. Wong
,
A. von Haeseler
,
L. Jermiin
Nature Methods
2017
Corpus ID: 547753
Model-based molecular phylogenetics plays an important role in comparisons of genomic data, and model selection is a key step in…
Expand
Highly Cited
2013
Highly Cited
2013
phyloseq: An R Package for Reproducible Interactive Analysis and Graphics of Microbiome Census Data
P. McMurdie
,
S. Holmes
PloS one
2013
Corpus ID: 2078725
Background The analysis of microbial communities through DNA sequencing brings many challenges: the integration of different…
Expand
Highly Cited
2013
Highly Cited
2013
MITOS: improved de novo metazoan mitochondrial genome annotation.
M. Bernt
,
A. Donath
,
+6 authors
P. Stadler
Molecular phylogenetics and evolution
2013
Corpus ID: 6938464
Highly Cited
2012
Highly Cited
2012
Bayesian Phylogenetics with BEAUti and the BEAST 1.7
A. Drummond
,
M. Suchard
,
Dong Xie
,
A. Rambaut
Molecular biology and evolution
2012
Corpus ID: 2522419
Computational evolutionary biology, statistical phylogenetics and coalescent-based population genetics are becoming increasingly…
Expand
Highly Cited
2012
Highly Cited
2012
Partitionfinder: combined selection of partitioning schemes and substitution models for phylogenetic analyses.
R. Lanfear
,
B. Calcott
,
S. Ho
,
S. Guindon
Molecular biology and evolution
2012
Corpus ID: 14773390
In phylogenetic analyses of molecular sequence data, partitioning involves estimating independent models of molecular evolution…
Expand
Highly Cited
2008
Highly Cited
2008
An improved general amino acid replacement matrix.
S. Le
,
O. Gascuel
Molecular biology and evolution
2008
Corpus ID: 14748147
Amino acid replacement matrices are an essential basis of protein phylogenetics. They are used to compute substitution…
Expand
Highly Cited
2007
Highly Cited
2007
BEAST: Bayesian evolutionary analysis by sampling trees
A. Drummond
,
A. Rambaut
BMC Evolutionary Biology
2007
Corpus ID: 1599605
BackgroundThe evolutionary analysis of molecular sequence variation is a statistical enterprise. This is reflected in the…
Expand
Highly Cited
2006
Highly Cited
2006
Relaxed Phylogenetics and Dating with Confidence
A. Drummond
,
S. Ho
,
M. Phillips
,
A. Rambaut
PLoS biology
2006
Corpus ID: 57864
In phylogenetics, the unrooted model of phylogeny and the strict molecular clock model are two extremes of a continuum. Despite…
Expand
Review
2004
Review
2004
Model selection and model averaging in phylogenetics: advantages of akaike information criterion and bayesian approaches over likelihood ratio tests.
D. Posada
,
T. Buckley
Systematic biology
2004
Corpus ID: 9953601
Model selection is a topic of special relevance in molecular phylogenetics that affects many, if not all, stages of phylogenetic…
Expand
By clicking accept or continuing to use the site, you agree to the terms outlined in our
Privacy Policy
,
Terms of Service
, and
Dataset License
ACCEPT & CONTINUE