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Brownian Dynamics

Simulations used to describe the motion of molecules in solution, generally discounting the effects of inertia.
National Institutes of Health

Papers overview

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2017
2017
We present a new method for sampling stochastic displacements in Brownian Dynamics (BD) simulations of colloidal scale particles… Expand
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2012
2012
Hydrodynamic interactions play an important role in the dynamics of macromolecules. The most common way to take into account… Expand
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Highly Cited
2010
Highly Cited
2010
A longstanding question in molecular biology is the extent to which the behavior of macromolecules observed in vitro accurately… Expand
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Highly Cited
2010
Highly Cited
2010
To begin to elucidate the principles of intermolecular dynamics in the crowded environment of cells, employing Brownian dynamics… Expand
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Highly Cited
2010
Highly Cited
2010
Theory and computation have long been used to rationalize the experimental association rate constants of protein-protein… Expand
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Highly Cited
2002
Highly Cited
2002
  • W. Im, B. Roux
  • Journal of molecular biology
  • 2002
  • Corpus ID: 43308266
Three different theoretical approaches are used and compared to refine our understanding of ion permeation through the channel… Expand
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Highly Cited
2002
Highly Cited
2002
Brownian dynamics (BD) simulations provide a practical method for the calculation of ion channel conductance from a given… Expand
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Highly Cited
2000
Highly Cited
2000
A computational algorithm based on Grand Canonical Monte Carlo (GCMC) and Brownian Dynamics (BD) is described to simulate the… Expand
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2000
2000
We discuss here the implementation of the Weighted Ensemble Brownian (WEB) dynamics algorithm of Huber and Kim in the University… Expand
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Highly Cited
1998
Highly Cited
1998
Thermal motions in supercoiled DNA are studied by Brownian dynamics (BD) simulations with a focus on the site juxtaposition… Expand
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