gSearch: a fast and flexible general search tool for whole-genome sequencing

@article{Song2012gSearchAF,
  title={gSearch: a fast and flexible general search tool for whole-genome sequencing},
  author={Taemin Song and Kyu Baek Hwang and Michael Hsing and Kyungjoon Lee and Justin Bohn and Sek Won Kong},
  journal={Bioinformatics},
  year={2012},
  volume={28 16},
  pages={2176-7}
}
BACKGROUND Various processes such as annotation and filtering of variants or comparison of variants in different genomes are required in whole-genome or exome analysis pipelines. However, processing different databases and searching among millions of genomic loci is not trivial. RESULTS gSearch compares sequence variants in the Genome Variation Format… CONTINUE READING