WGSQuikr: Fast Whole-Genome Shotgun Metagenomic Classification

@inproceedings{Koslicki2014WGSQuikrFW,
  title={WGSQuikr: Fast Whole-Genome Shotgun Metagenomic Classification},
  author={David Koslicki and Simon Foucart and Gail L. Rosen},
  booktitle={PloS one},
  year={2014}
}
With the decrease in cost and increase in output of whole-genome shotgun technologies, many metagenomic studies are utilizing this approach in lieu of the more traditional 16S rRNA amplicon technique. Due to the large number of relatively short reads output from whole-genome shotgun technologies, there is a need for fast and accurate short-read OTU… CONTINUE READING