VizBin - an application for reference-independent visualization and human-augmented binning of metagenomic data

@inproceedings{Laczny2015VizBinA,
  title={VizBin - an application for reference-independent visualization and human-augmented binning of metagenomic data},
  author={Cedric Christian Laczny and Tomasz Sternal and Valentin Plugaru and P. Gawron and Arash Atashpendar and Houry Hera Margossian and Sergio Coronado and Laurens van der Maaten and Nikos Vlassis and Paul Wilmes},
  booktitle={Microbiome},
  year={2015}
}
BACKGROUND Metagenomics is limited in its ability to link distinct microbial populations to genetic potential due to a current lack of representative isolate genome sequences. Reference-independent approaches, which exploit for example inherent genomic signatures for the clustering of metagenomic fragments (binning), offer the prospect to resolve and reconstruct population-level genomic complements without the need for prior knowledge. RESULTS We present VizBin, a Java™-based application… CONTINUE READING
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