Use of DAVID algorithms for clustering custom annotated gene lists in a non-model organism, rainbow trout

@inproceedings{Ma2018UseOD,
  title={Use of DAVID algorithms for clustering custom annotated gene lists in a non-model organism, rainbow trout},
  author={Hao Ma and Guangtu Gao and Gregory M Weber},
  booktitle={BMC Research Notes},
  year={2018}
}
ObjectiveThe DAVID gene functional classification tool requires adaptations for use in non-model species and there is little available information to guide selection of a kappa score. Our objective was to develop an R-script that allows custom gene identifiers and novel annotation information to be incorporated into analyses, then use such data to evaluate the number of differentially expressed genes (DEGs) in a comparison based on kappa score selection.ResultsUsing an R-script we developed and… CONTINUE READING
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