Transcript profiling of two alfalfa genotypes with contrasting cell wall composition in stems using a cross-species platform: optimizing analysis by masking biased probes

@inproceedings{Yang2009TranscriptPO,
  title={Transcript profiling of two alfalfa genotypes with contrasting cell wall composition in stems using a cross-species platform: optimizing analysis by masking biased probes},
  author={S. Samuel Yang and Wayne Wenzhong Xu and M. Tesfaye and J. F. S. Lamb and H. G. Jung and Kathryn A. VandenBosch and Carroll P. Vance and John W. Gronwald},
  booktitle={BMC Genomics},
  year={2009}
}
The GeneChip®Medicago Genome Array, developed for Medicago truncatula, is a suitable platform for transcript profiling in tetraploid alfalfa [Medicago sativa (L.) subsp. sativa]. However, previous research involving cross-species hybridization (CSH) has shown that sequence variation between two species can bias transcript profiling by decreasing sensitivity (number of expressed genes detected) and the accuracy of measuring fold-differences in gene expression. Transcript profiling using the… CONTINUE READING
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JFS: Development of alfalfa (Medicago sativa L.) as a feedstock for production of ethanol and other bioproducts

DA Samac, Jung H-JG, Lamb
In Alcoholic Fuels Edited by: Minteer SD • 2006
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