Tools for comparative protein structure modeling and analysis

@article{Eswar2003ToolsFC,
  title={Tools for comparative protein structure modeling and analysis},
  author={Narayanan Eswar and Bino John and Nebojsa Mirkovic and Andr{\'a}s Fiser and Valentin A. Ilyin and Ursula Pieper and Ashley C. Stuart and Marc A. Mart{\'i}-Renom and Mallur S. Madhusudhan and Bozidar Yerkovich and Andrej Sali},
  journal={Nucleic acids research},
  year={2003},
  volume={31 13},
  pages={3375-80}
}
The following resources for comparative protein structure modeling and analysis are described (http://salilab.org): MODELLER, a program for comparative modeling by satisfaction of spatial restraints; MODWEB, a web server for automated comparative modeling that relies on PSI-BLAST, IMPALA and MODELLER; MODLOOP, a web server for automated loop modeling that relies on MODELLER; MOULDER, a CPU intensive protocol of MODWEB for building comparative models based on distant known structures; MODBASE, a… CONTINUE READING
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